Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0252 ATGGCACAATCATCATCAACATCTCTCAAAGTTCATCAAATTCTTTCAATATCACCACAAAATGAAACCTCACCAACCACTTTTCCCTTCACTTTCTTTGACACTCTATGGCTAAAACTCCCACCGGTTGAACGTCTCTTCTTCTATGAACAAACCAACTTATCAACCACTTTTTTCTTTGACTCAATTCTTCCAAATCTCAAACACTCTCTTGAACTCACTCTCCAACACTTTCTCCTTCTTGTTGGTAACATCACATGGCCACAAGATTCATCTCACCCTATTATCAACTATGTCCCTAGTGATTCTATCTCTTTCATTGTAGCTGAATCCAATGAAGATTTCAACCTTTTATGTTCCAATCTTTGTGAAGCTAAAAAAAGACACACCCTTGTCCCAAAGTTGAATATTTCAGATGAAAAAGCATCAATTATTTCACTACAAGTCACTTTTTTTCCTAACCATGGATTTTGTATTGGTATAACCACACATCATGCAGCTGTTGATGGAAAATCTTCAACTTTGTTTATGAAAGTTTGGTCTTATTTTTGCTCTAACCTTGAAAAAAAATCACCCTCTTTATCTTTACCTCAAAATCTAACACCTTTTTTTGATAGGTCCATTATCAAAGACCCTTTAGGAATAAATGAAATTTATTCAAAAGGGTGGTCAAGTTTGGGTGGAGAAATAAATAATAGAAGTTTGAAGGTTTGGGAAACAATTAGTGCAACAAAAGGTGAAGCAATAAAAGGTCATTTTGAATTTTCACCTTTGGATATTCAAAAGCTTAAGAAATTTGCACAATCCAATCTTGAAAATAAAAAAATTTCAACTTTTGCTATTGTTTGTGCTTATTTGTTGGCATGTGCGGTTAAAGTTGACCAACCAAATTCCAATAAGGTAGCTTTTGTTTTTAGTGTGGATTGTAGGCCACGTTTGGATCCACCAATTAATGAAAATTATTTTGGTAATTGTATTGTGTCACAATTGGTTGTAGGCCAAACTGAGGAATTATTGAAAAAAGATTATGGATTTATTAGTGCTCTTAAAGGGATAATAAATGCTTTAAATTTTGAAAAAGGGGTGTTACATGAGGTAGAAATTTGGATGTTAAAGATACAATCAATTATGAGTGAGACTAAAAGGTTGTTTTCTATTGCTGGCTCACCTAGATTTGAGGTTTATAGTTTTGATTTTGGATGGGGAAAGCCTAAGAAAGTTGATGTTACTTCTATTGATAAAACAGGAGCATTTTCTCTTGGTGAAAGTAAGAATAATGATGGTGGAGTTGAGATTGGTTTGGCTTTGAACAAGCAACAAATGGAGGAATTTGCTCAACTTTTTGTTCAAGGACTTGAATCTTTGGAATAG 1371 0.3377 MAQSSSTSLKVHQILSISPQNETSPTTFPFTFFDTLWLKLPPVERLFFYEQTNLSTTFFFDSILPNLKHSLELTLQHFLLLVGNITWPQDSSHPIINYVPSDSISFIVAESNEDFNLLCSNLCEAKKRHTLVPKLNISDEKASIISLQVTFFPNHGFCIGITTHHAAVDGKSSTLFMKVWSYFCSNLEKKSPSLSLPQNLTPFFDRSIIKDPLGINEIYSKGWSSLGGEINNRSLKVWETISATKGEAIKGHFEFSPLDIQKLKKFAQSNLENKKISTFAIVCAYLLACAVKVDQPNSNKVAFVFSVDCRPRLDPPINENYFGNCIVSQLVVGQTEELLKKDYGFISALKGIINALNFEKGVLHEVEIWMLKIQSIMSETKRLFSIAGSPRFEVYSFDFGWGKPKKVDVTSIDKTGAFSLGESKNNDGGVEIGLALNKQQMEEFAQLFVQGLESLE* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0252 456 Gene3D - 247 455 IPR023213 -
Tpr2g0252 456 Gene3D - 9 234 IPR023213 -
Tpr2g0252 456 Pfam Transferase family 16 446 - -
Tpr2g0252 456 SUPERFAMILY CoA-dependent acyltransferases 273 455 - -
Tpr2g0252 456 PANTHER - 6 455 - -
Tpr2g0252 456 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 6 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0252 Tpr-Chr2 3238891 3240711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0252 46 450 Monolignol Biosynthesis Gene Families AT5G48930 22.759 2.08e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0252 - K13264 gmx:100127426 527.324