Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0250 ATGATTAACATTCCGAAAGACGCCGAATTTCCATTAAAACAAGAAGTTCTTCCATCAAATGCTTCAACTGCATCATCATCAACATCACAATGGCTAAAACTAAAAGATCCAAGAATTGTGAGGGTATCTAGAGCCTTTGGAACAAAAGATAGACATAGCAAAGTATACACAATTAAAGGATTAAGAGATAGAAGGGTAAGGCTTTCAATCCAAACAGCAATTCATCTTTATGATCTTCAAGATAGATTAGGGCTTAATCAACCTAGCAAAGTTGTTGATTGGTTGCTTAATATAGCTAAGGATGAAATTGATGAGCTTCCACCACTTCAAATACCTCAAGGAAATTTCACCTTAGGTTATCCATCTTTTGCTAATATTTCAAATGATGATGTTAGCCAAAACAATACTTCTATTTGTAAATCAAATTCCAAACAATTTTTAGGAGAAATTGTTACTAACAAAGGAAATTGGATAAATAGAAATGAAGCGGAAAAAGAGAAGAAAGAAGAGGATGCTAATTGTGATTGTGCGCAACATGTTTTGCCAAATAATCTCATGTCACATTTAGTGTCAGACAATGTCTCGAATAAGATTATCTCCGGTGGAGCAAATCAACCTTCTTTTTTGGGATTGTTGAACACCATGCCACTTGATTATCAATTGGAGACTTCAATATCTAATAATGTTGCTCATGAGTTATCAAATTTTGGATTTGTCAACCAAATTAAACATATAGATGGAATTGATGTTGTACCTTTTCCATCATCATTGTCTTTGTCAACACAACAATATTTCCCTTCACATGTTGGAACAATGGAGATGGATCCAAGACAAATCAATTATAGCTATGATCAAATGTGGAGTTCAAGTTCTCAAAACAATTCTCTCAATCCAACTCAACAACTCATTAGGGTGACTCCTAAAGACCAAGGTTTTCCATCCAAGTGA 948 0.3418 MINIPKDAEFPLKQEVLPSNASTASSSTSQWLKLKDPRIVRVSRAFGTKDRHSKVYTIKGLRDRRVRLSIQTAIHLYDLQDRLGLNQPSKVVDWLLNIAKDEIDELPPLQIPQGNFTLGYPSFANISNDDVSQNNTSICKSNSKQFLGEIVTNKGNWINRNEAEKEKKEEDANCDCAQHVLPNNLMSHLVSDNVSNKIISGGANQPSFLGLLNTMPLDYQLETSISNNVAHELSNFGFVNQIKHIDGIDVVPFPSSLSLSTQQYFPSHVGTMEMDPRQINYSYDQMWSSSSQNNSLNPTQQLIRVTPKDQGFPSK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0250 315 MobiDBLite consensus disorder prediction 290 315 - -
Tpr2g0250 315 Coils Coil 160 180 - -
Tpr2g0250 315 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 300 - -
Tpr2g0250 315 Pfam TCP family transcription factor 47 169 IPR017887 -
Tpr2g0250 315 MobiDBLite consensus disorder prediction 290 307 - -
Tpr2g0250 315 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 300 IPR005333 GO:0003700
Tpr2g0250 315 ProSiteProfiles TCP domain profile. 48 106 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0250 Tpr-Chr2 3211314 3213798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0250 31 180 TCP Transcription Factor Family AT3G02150 53.289 3.13e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr2g0250 TCP 1.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0250 - - cam:101511385 314.309