Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0246 ATGGCGGGCAAACGAGAGCTTGTGCTAGGTATCTGTGCCCCGGGAATTGTTGAGGTTCCGCCTGATAAACCTCCATCTAGACCTGTTGCATATGAGATTGATACATCAGATCATTTTTACACTGAAATGGCAACCCCTGACCGAGATGAGTTGATTAGATGGGCTCGGGAGATTGCCTTAAAGCTAAAGTTTGCAATTGTAATTGGCAAATCCGACAACGGCAGCGATAAGAGGAAGCAATATTTCAGGTTGGATTGCGAGCGGGGAGGCCGGTACGTGTCAACAAATAAGAAGCTAAAATCTGATCAAACCGGCACGAGGAAATGCGGCTGTCCATTTCGACTCCGTGGTTATTGTCATGCCGATAAAACATGGCATTTGACCGTTGTAAATGGCAAACATAACCACGAGTTGGACAAGGCAGTTGAAGGCCATCTCATTGTCGGTCGTCTCAAACCGGAAGAAAGGCAATGTATGGAGGAAATGTCAAGGAATTTGGTTCCGCCTAAGAATATAATGTCCACATTGAAAGATAGGGATCCAAACAACAAGACAACGGCAAAGCAACTCTACAATTTAAGTCATCGATTAAAACTTAAAATGAGGGCATCAATGACTGAAATGCAACACCTCTCCAAAAGACTTGTCGAGACCGGGTATTTTTTCAAACATAGGACGGTTGTTGCAGACGGATCCGAACACGTTCAAGACATTTTCTTTGCACATCCTAAATCTATAAGTTTGTTCAATTCTTTTCCTACTGTGCTTTTGATGGATTCGACATACAAAACAAACAAATACAAAATGCCGTTATTTGAGATTGTCGGATTCACATCAACTGGGAGATCTTTCAATGTTGGATTTGCTTGGCTTACCAATGAAAGAGAAGACAACTTCACTTGGGCTCTAGAGCAGTGTATCAGTCTCTTAAGGAATGAGGATGTTAGACCGAAGGTGATTGTCACCGATAGGGATTTGGCTCTGATGAATGCAGTTTCCGAGGTATTTCCAACATCGGCTGCAATGGTTTGTCGTTTCCATGTAAAAAAGAACGTGAGCTCTAAGATGAAGGAAATTGTGAAAATCAAGAATGGAGAGAATGAGAAGCAGACTGATGTGTGGGATCAAATCACCGATGCTTTTAATGATGTGTTAGAGTCGCCAACGGAAAAAGAATATGCTGACAATGTTATGGTGTTTAGGGAGCTCTGTGCGAGATGGCCAAAGTTTTTGCGTTATGTTGAAGAGACTGTCCTAGACACTGATAAAGAAAGGGTTGTCAATGCTTGGGTAGACCAACATATGCACATGGGGAATCACACCACGAATAGAGCTGAATCATGTCATGGTGTGTTGAAAGGTTACTTGAAGGACGGTAACGGTGACTTGGTGAAAGGATGGGAAGCGATAAATAAGATGTTGATATATCAGTTCACCGAAGCTATGGATCACATTTATGACGAAGCAAACAGGGTCGAAGAATGTGGTATGGATAGCAAAAAGTGTGCCTGTGTTATGAGAAGGACATACGGGTTGCCATGTGCATGCTTGATTGCGAAGAAGATAAAAAATAACAAACCTATCCGACTGGATGAGATTCACCCTCAATGGAAGAAACTGTGTTTCGAAGATGAGCCGGCACCGGGCGACGTGGCTGACGATTATGATTGCTTGGCTGAGTGGAAAGCAATTCAGGAACGATTAAAAACAGCCGATGTTAGCGTGAAGAATGATATTAGGAATCAACTTCGTCTCATTGCATATCCAGAAACCACCTCTGTGAAACCTCCGCTTCAAAAGGCCAAAACAAAAGGTGCTAGAAAGAAAAAATCAGTTCGTGTCACAAGATCCACGAGCAGGGATAAGTCTCGGTGGGAGCATGTTGATGATCATATTGCAGCTACACAGGCATCTCAGTCGCAACCAACAAAGTCAAAGCCGTCGACTTCACAAACAGTGCCTGAGGTGCCTAAAGAACTCGTCATCAGTACTTTGACTCCAGCACCTCCAGCACCTCCTGAAATTCCTTTTATCAACCATATGCCGAAGTTCATGCACCCATTTATTGAAGATATTATTGACGTTGAAGGTGACGGTTATTGTGGATACCGTGTGGTAGCTTTGCACCAAAAAGGAAATCAACAAGATTATGAGTTGATCAGACTGAACATGGAGAGGGAGCTGAGATTGCATAAGGAATCATATGTGGAGTTGTTCGATACTGAGCGTTACAAGTATGTCACGGATGCACTTTTCCCACCACCGAGAAGGAGTAAACATGTTATTGCAACCAAGGACAAATGGTTTACTTTTCCGGATATGGGTTACGTTGTGGCTACTCATTTTCAGAGGGTTGTTGTTCAACTATCAAATATGGAAAGGTGTGGAGCATCTAGAACTTGTTTCCCATTGCGTGGCAAACCTCCATCAGACACGTCAGACTTGGATTCCAAGATTATTTGCATCGGCGCGCTCGCTGACCACTTTGTGTTAGTGCGATTGAAAGTAGGATGTCTGATACCTCCAACGGCTCATCAGTGGAAAAACTCTTGTTCCGAAGAAGCTGCAGAATGGGAGCCCATGTTTTTGGATAGAATGCAAAAGTTTGGTGAGCTGTTGACCATTGAAAGAGCAGGCGATGACTTAGTCACGATTGGAAAGGGTAGCAAAGACGATCCGTTGGAATTGTAG 2691 0.434 MAGKRELVLGICAPGIVEVPPDKPPSRPVAYEIDTSDHFYTEMATPDRDELIRWAREIALKLKFAIVIGKSDNGSDKRKQYFRLDCERGGRYVSTNKKLKSDQTGTRKCGCPFRLRGYCHADKTWHLTVVNGKHNHELDKAVEGHLIVGRLKPEERQCMEEMSRNLVPPKNIMSTLKDRDPNNKTTAKQLYNLSHRLKLKMRASMTEMQHLSKRLVETGYFFKHRTVVADGSEHVQDIFFAHPKSISLFNSFPTVLLMDSTYKTNKYKMPLFEIVGFTSTGRSFNVGFAWLTNEREDNFTWALEQCISLLRNEDVRPKVIVTDRDLALMNAVSEVFPTSAAMVCRFHVKKNVSSKMKEIVKIKNGENEKQTDVWDQITDAFNDVLESPTEKEYADNVMVFRELCARWPKFLRYVEETVLDTDKERVVNAWVDQHMHMGNHTTNRAESCHGVLKGYLKDGNGDLVKGWEAINKMLIYQFTEAMDHIYDEANRVEECGMDSKKCACVMRRTYGLPCACLIAKKIKNNKPIRLDEIHPQWKKLCFEDEPAPGDVADDYDCLAEWKAIQERLKTADVSVKNDIRNQLRLIAYPETTSVKPPLQKAKTKGARKKKSVRVTRSTSRDKSRWEHVDDHIAATQASQSQPTKSKPSTSQTVPEVPKELVISTLTPAPPAPPEIPFINHMPKFMHPFIEDIIDVEGDGYCGYRVVALHQKGNQQDYELIRLNMERELRLHKESYVELFDTERYKYVTDALFPPPRRSKHVIATKDKWFTFPDMGYVVATHFQRVVVQLSNMERCGASRTCFPLRGKPPSDTSDLDSKIICIGALADHFVLVRLKVGCLIPPTAHQWKNSCSEEAAEWEPMFLDRMQKFGELLTIERAGDDLVTIGKGSKDDPLEL* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0246 896 MobiDBLite consensus disorder prediction 595 655 - -
Tpr2g0246 896 MobiDBLite consensus disorder prediction 633 655 - -
Tpr2g0246 896 Pfam Transcription factor AFT 89 138 IPR014842 GO:0000981|GO:0036086
Tpr2g0246 896 MobiDBLite consensus disorder prediction 616 631 - -
Tpr2g0246 896 Pfam MULE transposase domain 255 351 IPR018289 -
Tpr2g0246 896 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 72 480 IPR031052 GO:0006355
Tpr2g0246 896 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 72 480 - -
Tpr2g0246 896 MobiDBLite consensus disorder prediction 601 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0246 Tpr-Chr2 3190647 3193969 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g0246 MULE 6.5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0246 - - gmx:100800409 543.502