Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0245 ATGTCTAAAAAGGCTATGATGACATCATCAATGAAGGATGAAAATCAAGAATTGCAGAAGCAAATTGGATGTATCAGTGGATTTTTCCAGTTGTTTGATCGTCATAGGTTCCTCACAAGCCACAACAATAGTCACAATATACCAAATCAAGGGGGAACAAGTAATAACATCAAAGAGCTGAATAATACAACACAAAAAGCAAAGGCAAAGAATGTGAAAGTAGCAAGAGAGAATCAACAATCCTCGACAGAATCATCATCAGGAATATCAATGTCTTCGTCATCTTGTTCATCTAGCATGTCATCCCTCGAGTTTAACCGAACAATACAGATAGAACCACCATCAGTAAGTCCGATGAAAGTCACGGAAAACTCCAAATCAGAAGCAGAAATGAAGCAACTTGGCAACGAAAGACATCAGCCGCTTGATTTCCATGATATTGTAAAAGACTCCATGCATGTAGATTCACAAAGATTTTTATCGGTGAAAACTATGGCTAAAGAGGAAAAGAAGAGTCGAATCTTGAAACACGTTGATTCTCCGCGGCCTATGACTGCTTGGGATTCACCAAGACTCTCCTATGATGGGCGAGATATACAAAGCACACTCAAATCTGCAACGAAGCACAAGGAACTCCCGAGGCTTTCCTTGGACAGCAAGGAAAGGTCCGTCAAAAGTTTCAACGAAGGAGCAAAAAATCGGAACCTTTTGAAGGGTCCACAGAGAGTGTGTGGAGGCTCGAACACAATGGTCAAGCAGATGGAAGAACCAGACACGTCTAAAAGACCATCAAGTGTTGTGGCAAAGTTGATGGGACTAGAAGCATTCCCTGATTGGAGTGAAGAAACTTGTGATATCTGCTACACCGACAAAGACGAGACCTTTGCAGGATCTAGAATGAGTGATGAATACAAGCAACAGAAAGATTCGGAATTCTCAAGGACAATCAAAGGGACTACCTTGCTTCAATCTCGGAGGGACGGTTCAATCACAAATGTGACACCATATTCACAATTACAGGCTTCCAAGAGTTCAAACCGATCCCTCTCAGTTTACGGTGAAATTGAGAAAAGGATGGCAGATCTAGAGTTCAAAAAATCCGGAAAGGATCTTAGAGCCCTTAAACAGATTCTTGAAGCAATGCACAGATACAAAGAATCATTAGATACTACAAGTGACCAGGCTTCAAATTCTCCATATGACAATAGGAGTAATAGTAGTGTCAGTGAAAACTTGAATGTACAAAGCCCAAGAACACGGCAGAAGAACCCGACATCTGTCACAGTTGAGAGATTGAATTCAACTCAGGGTAGTAAATCTCCGATTGTCATCGTGAAACCGACAAAGGTTGCAAGGAAAACAAATAATTCTTCCACAGAAATGTCAATTAATGTTAAACCGTTAGGTAGCAAGGTTTCGCGCAGTGATCCTACCAACGGAATGTTGGCTGACAAGCTTGGCAGGCAAACAGCAAAAGGTAGTCCGGCAATCAAACACGTCAAAGATCCTATTAGTCCACCTTTTCGTTCAGTGGACAAAAGCAATAAGATGAGAACTTCAAAATTGATGCAATCCTCAAAAGTTCCTCAAGTCATCATTGGAGAAAATAACAGCCCGAGACTACAAAAGAAGTTCGGTTTAGAGAGGCGTTCCCCGCCAAGCAGCCCATCATCAGACATCAGCAGTAACAGAAGACAGCAAAATAGGCAATCGATGGAATTGTCTTCCCCGAGAACACCATCTAGACAAAAAATCTCAACTTTGCAGGAAATAAATGAAAAGGACTCGAGCAAGGAAAGCTTTATGGCTGAAACAATAGTTACTGCAGAACAACCTAGTCCTGTGTCCGTTCTTGATGCCGCGTTCTATAGAGAAGATCCACCTTCTCCGGTAAAAAGGAAAACAAACATCTCAAAAGATTTAGATGAAGTTCTGAGCACTTATGATACTACTAGTGAGGAGGACTCGGAAGACACAAAAGTCAACTTCAACAATGGAACCAGTGATATTGACTTGATAACTCACAATTTAGTTCAAATTCTGCAACAATTTGAACACAGTGACGATGAAAGATTCACGAGTTTCAGTGACCACAAAGATCCCGACCACAAATATATATCAGAAATACTCCTAGCATCGAGGCTGCTTGCCAGTCCTAGATCTAGCCAAGCATTGCATTCGTCAGGTTACCCGATTAACCCAATGTTGTTCCTTGCACTAGAGAAAATAAAGACAAACAAGATGCACGGCAACATTGGTAATACGAACAATCATGACAAAATGCAAAGAAAGCTCATCTTTGATGTCGTTAATGAAATGCTATTTCAAAAGCTAATATCGGAGAGTTCTTACAAGCCATATCAGCAAAAAGTAACAAAACCAGAAGGACAGCATCTTTTGGATATGCTTTGCACAGAAATTGATAAGTTACAACATAAAAATAAAAATGTCAGCGTGGCTAATGAGGACGAGTATTTGACAAGTATCTTGTTAGAAGATTTGGTACAACACCCGACAAATACAGAATGCTACAATGAGATACCAAATGTTGTGTTGGATATTGAAAGATTGATCTTCAAAGATTTGATAACTGAAATTGTGAGAACTGAGAAGTGA 2616 0.4029 MSKKAMMTSSMKDENQELQKQIGCISGFFQLFDRHRFLTSHNNSHNIPNQGGTSNNIKELNNTTQKAKAKNVKVARENQQSSTESSSGISMSSSSCSSSMSSLEFNRTIQIEPPSVSPMKVTENSKSEAEMKQLGNERHQPLDFHDIVKDSMHVDSQRFLSVKTMAKEEKKSRILKHVDSPRPMTAWDSPRLSYDGRDIQSTLKSATKHKELPRLSLDSKERSVKSFNEGAKNRNLLKGPQRVCGGSNTMVKQMEEPDTSKRPSSVVAKLMGLEAFPDWSEETCDICYTDKDETFAGSRMSDEYKQQKDSEFSRTIKGTTLLQSRRDGSITNVTPYSQLQASKSSNRSLSVYGEIEKRMADLEFKKSGKDLRALKQILEAMHRYKESLDTTSDQASNSPYDNRSNSSVSENLNVQSPRTRQKNPTSVTVERLNSTQGSKSPIVIVKPTKVARKTNNSSTEMSINVKPLGSKVSRSDPTNGMLADKLGRQTAKGSPAIKHVKDPISPPFRSVDKSNKMRTSKLMQSSKVPQVIIGENNSPRLQKKFGLERRSPPSSPSSDISSNRRQQNRQSMELSSPRTPSRQKISTLQEINEKDSSKESFMAETIVTAEQPSPVSVLDAAFYREDPPSPVKRKTNISKDLDEVLSTYDTTSEEDSEDTKVNFNNGTSDIDLITHNLVQILQQFEHSDDERFTSFSDHKDPDHKYISEILLASRLLASPRSSQALHSSGYPINPMLFLALEKIKTNKMHGNIGNTNNHDKMQRKLIFDVVNEMLFQKLISESSYKPYQQKVTKPEGQHLLDMLCTEIDKLQHKNKNVSVANEDEYLTSILLEDLVQHPTNTECYNEIPNVVLDIERLIFKDLITEIVRTEK* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0245 871 Coils Coil 57 77 - -
Tpr2g0245 871 MobiDBLite consensus disorder prediction 517 537 - -
Tpr2g0245 871 MobiDBLite consensus disorder prediction 64 95 - -
Tpr2g0245 871 MobiDBLite consensus disorder prediction 388 431 - -
Tpr2g0245 871 Pfam Domain of unknown function (DUF4378) 702 865 IPR025486 -
Tpr2g0245 871 PANTHER LONGIFOLIA PROTEIN 1 589 - -
Tpr2g0245 871 PANTHER LONGIFOLIA PROTEIN 591 870 - -
Tpr2g0245 871 MobiDBLite consensus disorder prediction 551 587 - -
Tpr2g0245 871 MobiDBLite consensus disorder prediction 488 597 - -
Tpr2g0245 871 MobiDBLite consensus disorder prediction 390 431 - -
Tpr2g0245 871 PANTHER LONGIFOLIA PROTEIN 1 589 IPR033334 GO:0051513
Tpr2g0245 871 PANTHER LONGIFOLIA PROTEIN 591 870 IPR033334 GO:0051513
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0245 Tpr-Chr2 3183743 3190020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0245 139 870 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 31.913 2.16e-70 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0245 - - cam:101511926 1216.83