Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0242 ATGGAGTCGGTGAAACGTGTTTTTCAAGAAATAAAAAAAAAAGGTCGAGTGTTTGGTTCAGGTTCCAGTTCCAGTCAAGAAACGGACATAAAAGATTTGTACACTTTGGCAACATTGGTTGAAGAGATTAAACATCAGCATGTTTTGTTGGATCGACCAAACAAAGAGATAGACAAGCTATTGACTCACATAAGAGGACATGAAGAGCTTCTACGAAAAGGAAAGAAACTTGATCCATGGAAGTTTAACTCTGTTATTTACAGAGAGTTAGCTTTGGACGTTTCTGCTGCTCCTTTGGACATTGAAAAGTTGAAACGAGAAGGACAATTATTGAGGTATGAAGTGTTCTTAAGTTTCAGAGGCGAAGACACACGTGCTTCATTCATTTCACATCTATATGCTTCTCTTCAAAACAATGGAATTACTGTTTTTAAAGACGATGAGTCACTACAAAGGGGAGATCACATTTCAACTTCACTAATGCAATCAATCAAAGAGTCTAGAATTTCTGTTATTGTTTTCTCAAAGAACTATGCAGATTCGCAATGGTGTTTGGAGGAGTTGATGAAAATAATGGAATGTTACAGAAACATACGGCAGATAGTCCTGCCACTTTTCTACGATGTTGATCCTTCAGACGTACGTCACCAAACTGGTGAGTTTGGAAAAGCTTTTCAAAGTCTCTTGACCAAAACTTTGGAGAAGGATGCGTCGCGGAAATGGAGGGATACCCTTCGTGATGCTACTGCCCTTGCTGGCATTGTACTCGTAAATTCCAGGGATGAAAATAAGGCCATCAAAGAAATTGCTGAAAAAATTGTTCATTTGCTTGACAAGAAAGACTTGTTCATTGCTGAAAAACCAGTGGGAGTTGATTCTCGAGTGGAAGATGCTATTCAACTGTTAGACATCCAACAATCAAATGATGTACTACTACTTGGGATGTGGGGTATGGGGGGAATCGGAAAAACAACTATTGCTAAAGCCATTTATAACACAATTGGCCGCAATTTTGAAGGCAGAAGCTTCGTTTCAAATGTTAGAGAAGTTTGGCAGCAACCTGCTGGAAAAGTGAGTTTACAAGAACAACTTTTATCCAATATCTTCAAAGGAACGACGACGAAGATAGAAAGTATTGATGATGGAAAAATCAAATTAAAGGATAGACTTTCTCATCATAGAGTACTTATTGTACTTGACGATGTGGATGAGTTGGAGCAATTGGATGCTTTGTGTGGAAATCGTAATTGGTTTGGTAAAGGGAGTAGAATAATTATCACAACTAGAAACAAGCATATAGTTGGAAGGAATGTAGTCGACAAAATATTCTCAAATAAAGAATTGGATGAAAGAGAATCAACTGAGCTTTTTGAATGGCATGCATTCAAGCAAGTGAGTCCTACAGAAGAATTTGTTGCAATTTCCAAAAATGTAATTATGTATTCTGGAGGGTTGCCGCTAGCTCTAGAAGTCCTTGGACGTTATTTGTTTGATAGGGATGTAAAAGACTGGGAGGATGTATTGGAGAAACTAAAAAGAATTCCCAATGACAAAGTACATAAAAAGTTACAAATAAGCTATGATGGTTTAGAGGATGATTTCCATAAAGCAATATTTCTAGACATAGCTTGTTTCTTTATTGGGATGGACAAAAATGAAGTTATACATATATTAAATGGCTGCGGATTTTATGCAGAAAATGGAATAAATGTCCTTGTTGAGCGGAGCCTAGTAACTATTGATGATGAAAACAAGCTTAGAATGCATGATTTGTTGCGGGATATGGGAAGAGAAATCATTTGTGATAAACCACGAAAGGAGCCTGAGGAGCGTAGTAGGCTGTGGTTTCATGAGGATGTTCATAATGTATTAGCAGGAAAAACCGGAACAAAAGCCATTGAAGGATTAGCTTTGAAGTTGCCAAGAGATGGTGCGAAATGTTATAATACCAAAGCATTTACGAAGATGAAGAAACTCAGGTTGCTTCAATTTGTTGGTGTACAACTTGATGGGGATTTTGAATATCTTTCAAAAAATCTGAGATGGCTTTCTTGGAAGGGATTTCCTTTATCATGCATACCTGCAAACTTTTATCAAGGAAATTTAGTTTCCATTGAGTTGGAAAACAGCAATGTCAAAGTTGTGTGGAAAGAGACCCAGAGGATGGAGAAGCTAAAAATTCTTAATCTTAGTCATTCTCATTATCTGACGCAAACTCCAGACTTTTCGAACATGCCTAATCTTGAAAAGCTAGTACTTACAGATTGTCCAATGCTGTCTAAGGTTTCTCATAGCATTGGACATCTCAGTAAAGTTCTTCTAATAAATTTGGAAGATTGTGTTAGCCTTTGCAGCCTCCCAAGAAGCATCTATAAGTTGAAATCTGTGAAAACTTTCATTCTTGCTGGTTGTAAAAAGATTAAAAAGTTGGAAGAGGACCTGGAACAAATGGGATCTTTAACCACTCTGCTTGCAAATAACACCGCAATAACAAGAATGCCTTTGTCAATATTAAGGTCAAAAAGCATTGGGTATATTTCTTTGCGCGATTATGAAGGACTCTCGCATGATGTATTTCCATCTATCATTTGGTCTTGGATGCCACCAACAAGTGCACTTTCATCCTTATTCCAAACATCCGTTGCCATGTCATTTATTGTGTCTTTAGATATACATATACCAGATGGTAGTTCCCAGGAACTGTCATCTATTTTCAACAATCTTTCATGGCTTCGAAGCCTATGGGTAAAGTTTGGCTGTGAACTTCAACTTTCTGAAGATGCAAAAATCATTTTGGATGCTTTTTACGCCTCACTTTCGAAGGAATTGGAATCGACTTCAGATACTTCCCAAGCATCAAATATGAAAACTTCTGCATTAACTCAAAGCTGCAGTCACTTGCACGTTTCTGAATCAAAACCTTCCATGAAGTCTGTTCTAATACAAATGGGCATGAATTGCCAAGCCACCAATAATCTGAAAGAAAACATTTCACAGAATATGAATGATTGGTTAACCTTCAATTGTGAAGGTTCTTCTGTAAGTTTTGAAGTCCCTCAAGTGGAAGGGCGTATGTTGAAGGCAATAGTAATATGCATTGCCTATTCTTCAACCCCAGATGACATAGCATCAGATTGCCTTACAAACTTGTTGGTGAAAAATTACACAAAGGCCACCATTCAGCTCTATAAAAGAGAGGCAGTATCGTCCTTAGGGGATGAGGAGGGTCAGAGAGTAGTATCAAGTATAGAACCTGGTAACAAAGTGGAAGTAGTTGTTGTTTTTGAAAACAGTTTCATTGTAAAGAAGACAACAATTTATCTGATATATGATGAACCGGTTGCTGAAAAAGTGGAGGATTCTCATGGAATAGATAAGAAAGTTATTCTTAGCAGTGTTGAAGAAAACAAATGCTTTGTCGGAAAGGTCTCTTCTCATGCGCAAGATAAGAGTGTTATTTATAGTAGTGGTGGAGAAAATGAATGCTGTGTAAGAGAGGTCTCTCCTCATGCACAAGATAAGAATGAACCTATTGTTGAAAAACTGGAAGAGTTTCTTGATGCACAAGTTAAGAATGAACCAACTGTTGATATAGTGGAGTTTCTTGATGCACAAGATAAGAATGGTGAAGACAAGGAAGGATTTGTCAGAAAGGTCTCTCCTCAAGTGCCTCTCATGGATGACTTAAAACAAAAGAGAAGGAACATTCTCATGAGGATATGGCAGACAGTAAAAGAATGGTTTTAA 3747 0.375 MESVKRVFQEIKKKGRVFGSGSSSSQETDIKDLYTLATLVEEIKHQHVLLDRPNKEIDKLLTHIRGHEELLRKGKKLDPWKFNSVIYRELALDVSAAPLDIEKLKREGQLLRYEVFLSFRGEDTRASFISHLYASLQNNGITVFKDDESLQRGDHISTSLMQSIKESRISVIVFSKNYADSQWCLEELMKIMECYRNIRQIVLPLFYDVDPSDVRHQTGEFGKAFQSLLTKTLEKDASRKWRDTLRDATALAGIVLVNSRDENKAIKEIAEKIVHLLDKKDLFIAEKPVGVDSRVEDAIQLLDIQQSNDVLLLGMWGMGGIGKTTIAKAIYNTIGRNFEGRSFVSNVREVWQQPAGKVSLQEQLLSNIFKGTTTKIESIDDGKIKLKDRLSHHRVLIVLDDVDELEQLDALCGNRNWFGKGSRIIITTRNKHIVGRNVVDKIFSNKELDERESTELFEWHAFKQVSPTEEFVAISKNVIMYSGGLPLALEVLGRYLFDRDVKDWEDVLEKLKRIPNDKVHKKLQISYDGLEDDFHKAIFLDIACFFIGMDKNEVIHILNGCGFYAENGINVLVERSLVTIDDENKLRMHDLLRDMGREIICDKPRKEPEERSRLWFHEDVHNVLAGKTGTKAIEGLALKLPRDGAKCYNTKAFTKMKKLRLLQFVGVQLDGDFEYLSKNLRWLSWKGFPLSCIPANFYQGNLVSIELENSNVKVVWKETQRMEKLKILNLSHSHYLTQTPDFSNMPNLEKLVLTDCPMLSKVSHSIGHLSKVLLINLEDCVSLCSLPRSIYKLKSVKTFILAGCKKIKKLEEDLEQMGSLTTLLANNTAITRMPLSILRSKSIGYISLRDYEGLSHDVFPSIIWSWMPPTSALSSLFQTSVAMSFIVSLDIHIPDGSSQELSSIFNNLSWLRSLWVKFGCELQLSEDAKIILDAFYASLSKELESTSDTSQASNMKTSALTQSCSHLHVSESKPSMKSVLIQMGMNCQATNNLKENISQNMNDWLTFNCEGSSVSFEVPQVEGRMLKAIVICIAYSSTPDDIASDCLTNLLVKNYTKATIQLYKREAVSSLGDEEGQRVVSSIEPGNKVEVVVVFENSFIVKKTTIYLIYDEPVAEKVEDSHGIDKKVILSSVEENKCFVGKVSSHAQDKSVIYSSGGENECCVREVSPHAQDKNEPIVEKLEEFLDAQVKNEPTVDIVEFLDAQDKNGEDKEGFVRKVSPQVPLMDDLKQKRRNILMRIWQTVKEWF* 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0242 1248 SMART till_3 112 251 IPR000157 GO:0007165
Tpr2g0242 1248 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 118 1110 IPR044974 GO:0006952
Tpr2g0242 1248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 283 542 IPR027417 -
Tpr2g0242 1248 Gene3D - 111 274 IPR035897 -
Tpr2g0242 1248 Gene3D Ribonuclease Inhibitor 637 1001 IPR032675 -
Tpr2g0242 1248 SUPERFAMILY L domain-like 587 915 - -
Tpr2g0242 1248 Pfam NB-ARC domain 293 526 IPR002182 GO:0043531
Tpr2g0242 1248 PRINTS Disease resistance protein signature 312 327 - -
Tpr2g0242 1248 PRINTS Disease resistance protein signature 389 403 - -
Tpr2g0242 1248 PRINTS Disease resistance protein signature 482 496 - -
Tpr2g0242 1248 PRINTS Disease resistance protein signature 720 736 - -
Tpr2g0242 1248 Gene3D - 275 440 IPR027417 -
Tpr2g0242 1248 SUPERFAMILY Toll/Interleukin receptor TIR domain 112 251 IPR035897 -
Tpr2g0242 1248 Gene3D - 447 531 IPR042197 -
Tpr2g0242 1248 CDD AAA 289 430 - -
Tpr2g0242 1248 Pfam TIR domain 113 275 IPR000157 GO:0007165
Tpr2g0242 1248 ProSiteProfiles TIR domain profile. 111 277 IPR000157 GO:0007165
Tpr2g0242 1248 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 118 1110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0242 Tpr-Chr2 3152492 3157726 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0242 113 837 WRKY Transcription Factor Family AT4G12020 32.176 1.10e-87 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0242 - - cam:101512894 1434.47