Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0240 ATGGAGATTTTGACAAGTATTGTTGCAAGTATCATAAAAAAGAGGCGAATATTTGGTGGCACTCGCACACGTGAAACAAACATAGAAGCTTTGGACAAAGGATTATTAAGAAGGTATGAAGTGTTCTTAAGTTTTAGAGGCGAAGACACACGTGCTTCATTCACTTCACATTTATATGCTTCTCTTCAAAACACTGGAATCAATGTTTTTAGAGACGATGATTCTATTCAAAGAGGAGATCACATTTCAACATCACTACTGCGAGCAATCGAACAGACTCAAATTTCTGTTATTATTTTGTCAAAGAATTATGCAGATTCCGGATGGTGTTTAGATGAGTTGGTGAAAATAATGGAATGTCACAGAACCTTACGGCAGATAGTGCTGCCAGTGTTCTATGACGTAGATCCTTCAGATGTTCGTCACCAAACTGGGGAGTTTGGAAAAGCGTTTCAAAATCTTTCCAACAGAACTTCGGAGGACAAGTTGCTGAAATGGAGAGATGTGCTTCGTCAGGTTGCTGGCCTTGCTGGCTTTGTGGTTCTAAATACAAGGAACGAAAGTAAGGCCATCAAGGATATTGCTGAAAAAATTACTCATTTACTTGACAAGAAAGACTTGTTCATTGCTGATAAACCAGTGGGAGTTGATTCTCGAGTGCAAGATGTCATTCAACTACTAGACATGCAACAATCAAATAGTGTACTACTTCTTGGGATGTGGGGTATGGGGGGAATCGGAAAAACAACCATTGCAAAAGCCATCTATAATGAGATTGGCCGTAATTTTGAAGGTAGAACCTTTCTTGCAAATGTTAGGGAAGTTTGGGAGCAACCTGCTGGACAAGTGAATTTACAAAATCAACTTCTATCTAATACCTTCAAAGGAACGACAGCCAATATACAAAGTATTGATTCAGGAAAAATTATATTAAAGGAAAGGCTTTGTCATAATAGATTACTTATTGTACTCGACGATGTGGATGACTTGGAGCAGTTGGATGCTTTGTGTGGAAGTCGTGATTGGTTTGGTCCGGGGAGTAGAATAATTATCACAACCAGAAATATGCACATACTTAGAGGGAATAGAGTTGACGAAGTATACTCAAATAAAGAAATGAATGAAAGTGAATCAATTGAGCTTTTTAAATGGCATGCATTCAAGCAAGCGAGTCCCAACGAAGAATTTGTTGGAATTTCCAGAAATGTCGTTATGTATTCTGGGGGATTGCCGCTAGCGCTAGAAGTTCTTGGGCGCTATTTGTTTGAGAGGGAGGTAATAGAATGGAGATGTGTATTGGAGAAACTAAAAAGAATTCCCAATGACAAAGTACATAAGAAGTTAAAAATAAGCTATGATGGTTTAGACGATGATTCCCAAAAAGCAATATTCCTCGACATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTTATACATATATTAAATGGCTGTGGATTTTTTGCAGAAGATGGAGTAAGAGTCCTTGTTGAGCGAAGCCTAGTAACTGTTGATGATAACAACGAACTCAGAATGCATGATTTGTTGCGGGATATGGGAAGAGAAATCATTTGTAATAAACCACAAAAGGAGCCTGAGGAACGTAGCAGGTTGTGGTTTCATGAGGATGTTGATGGTGTCTTAGCAGGACAAACAGGAACAAAAGCCATTGAAGGATTGGCTTTGAAGTTGCCAAGAGATGGTCCGAAACGTTATAATACCAAAGCATTTATGGAGATGAAGAAACTCAGATTGCTTCAACTTGTTGATGTACAGCTTGATGGGGATTTTGAATATCTTTCAAAAAAATTGAGATGGCTTTCTTGGAAGGGATTTCCTTTATCATGCATACCTACAAACTTTTATTCAGGAAACTTAGTTTCCATTGAGTTAGAAAACAGCAATGTCGAAATTATGTGGAAAGAGACACAGAGGATGGAGAAGTTGAAAATTCTAAACCTTAGTCATTCTCATTATCTGACACAGACCCCTGACTTTTCAAACATGCCTAATCTTGAAAAGCTAGTACTGAAAGATTGTCCAAGGTTGCGTGAGGTCTCCCATAGCATTGGACATCTTAATAAAATTCTTCTGATAAATTTGGAAGATTGTATTAGCCTTTCTAGCCTTCCAAGAAGCATCTATAAGTTGAAATCTCTTACAACTCTCATTCTTTCTGGCTGTTCAATGATTAACAAGTTGGAAGAGGACTTGGAACAAATGGAATCTTTAACCATTCTGCTTGCAAGTAAAACTGCAATAACAAGTGTGCCCTTTTCAATTGTAAGGTCAAAAAGCATTGGTTATATTTCTTTGTGCGGCTATGAAGGATTCTCACAGGATGTATTTCCATCAATCATTTGGTCTTGGATGTCACCAACAAGTGGTCTTTCATCCCCATTTCAAACATCTCCTGCCATGTCATCTCTTGTTTCTTTAGATATTCCACATAGTAGTTCCCAGGAACTGTCATCTATTTCAAACCACATTTCAAGGCTTCGAAGCCTATGGATAGAGTGTGGCACAGAACTTCAACTTTCTGAAGATGCAAAACTCATATTGGATGCTTTATATGCCACACTTTCAGAGGAATTGGAATCGACTTCAGCTACTTCACAAGTATCAAAAATGAAAACTTCTGAATTAGTTCAATGCTGCAGTCAATTGCATGTTTTGGGATCAAAAGATTCCTTGAAGTCTGTTCTAATACAGTTGGGAATGAATTGCCATGTCACCAATAATCTGAAAGAACACATTTTACAGAAAATGGATGAGAATGGGAGTGGAGGTTGTTTCCTTCCGGGTGACAGATATCCATATTGGTTAACCTTCAATTGTGAAGGTTCTTCTGTAACTTTTGAAGTCGCTCAAGTGGAAGGGCGTATGTTGAAGACATTAATGATATGCATTGTCTATTCTTCAACCCCCGATAACATATCATCAAATGGCCTTACAAACTTGTTGGTGAAAAATTATACAAAGGCCACAATTCAGCTTTATAAAAGAGAGGCATTAGTCGCCTTTGAAGACGAGGAGGGGCAGAGAGTAGTATCAAGTATAGAACCTGGTAACAAAGTGGAGGTTGTTGTTGTTTTTGAGAAAGGTTTCATTGTGAAGAAGACAGCTGTGTATCTTGTATATGATGAACCAAATGCTGAAATAGTGGAGGAGTTTCATGCACAAGATAAGAATGTTATTGTTAGTAGTGGTGAAGAAAATGAATGCTTTGTCAGAAAGGTCTCTACCAATTCACAAGATAAGAATGTTATTGTTAGTAATGGTGAAGGAAATGAAAGCTTTGTAAGAGAGAGATTTCCTCAAGTGGTGCCTATGAATGATTTAGCACATAACAAAAGGAAGACAGTAAAAGAATGGTTGGGTAAGTATCGGTGCTGCTAG 3402 0.3798 MEILTSIVASIIKKRRIFGGTRTRETNIEALDKGLLRRYEVFLSFRGEDTRASFTSHLYASLQNTGINVFRDDDSIQRGDHISTSLLRAIEQTQISVIILSKNYADSGWCLDELVKIMECHRTLRQIVLPVFYDVDPSDVRHQTGEFGKAFQNLSNRTSEDKLLKWRDVLRQVAGLAGFVVLNTRNESKAIKDIAEKITHLLDKKDLFIADKPVGVDSRVQDVIQLLDMQQSNSVLLLGMWGMGGIGKTTIAKAIYNEIGRNFEGRTFLANVREVWEQPAGQVNLQNQLLSNTFKGTTANIQSIDSGKIILKERLCHNRLLIVLDDVDDLEQLDALCGSRDWFGPGSRIIITTRNMHILRGNRVDEVYSNKEMNESESIELFKWHAFKQASPNEEFVGISRNVVMYSGGLPLALEVLGRYLFEREVIEWRCVLEKLKRIPNDKVHKKLKISYDGLDDDSQKAIFLDIACFFIGMDRNDVIHILNGCGFFAEDGVRVLVERSLVTVDDNNELRMHDLLRDMGREIICNKPQKEPEERSRLWFHEDVDGVLAGQTGTKAIEGLALKLPRDGPKRYNTKAFMEMKKLRLLQLVDVQLDGDFEYLSKKLRWLSWKGFPLSCIPTNFYSGNLVSIELENSNVEIMWKETQRMEKLKILNLSHSHYLTQTPDFSNMPNLEKLVLKDCPRLREVSHSIGHLNKILLINLEDCISLSSLPRSIYKLKSLTTLILSGCSMINKLEEDLEQMESLTILLASKTAITSVPFSIVRSKSIGYISLCGYEGFSQDVFPSIIWSWMSPTSGLSSPFQTSPAMSSLVSLDIPHSSSQELSSISNHISRLRSLWIECGTELQLSEDAKLILDALYATLSEELESTSATSQVSKMKTSELVQCCSQLHVLGSKDSLKSVLIQLGMNCHVTNNLKEHILQKMDENGSGGCFLPGDRYPYWLTFNCEGSSVTFEVAQVEGRMLKTLMICIVYSSTPDNISSNGLTNLLVKNYTKATIQLYKREALVAFEDEEGQRVVSSIEPGNKVEVVVVFEKGFIVKKTAVYLVYDEPNAEIVEEFHAQDKNVIVSSGEENECFVRKVSTNSQDKNVIVSNGEGNESFVRERFPQVVPMNDLAHNKRKTVKEWLGKYRCC* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0240 1133 Gene3D Ribonuclease Inhibitor 562 917 IPR032675 -
Tpr2g0240 1133 SUPERFAMILY Toll/Interleukin receptor TIR domain 38 179 IPR035897 -
Tpr2g0240 1133 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 45 1048 IPR044974 GO:0006952
Tpr2g0240 1133 Pfam NB-ARC domain 218 452 IPR002182 GO:0043531
Tpr2g0240 1133 CDD AAA 214 365 - -
Tpr2g0240 1133 Gene3D - 36 199 IPR035897 -
Tpr2g0240 1133 Gene3D - 372 456 IPR042197 -
Tpr2g0240 1133 PRINTS Disease resistance protein signature 237 252 - -
Tpr2g0240 1133 PRINTS Disease resistance protein signature 314 328 - -
Tpr2g0240 1133 PRINTS Disease resistance protein signature 407 421 - -
Tpr2g0240 1133 PRINTS Disease resistance protein signature 645 661 - -
Tpr2g0240 1133 SUPERFAMILY L domain-like 512 839 - -
Tpr2g0240 1133 SMART till_3 38 176 IPR000157 GO:0007165
Tpr2g0240 1133 ProSiteProfiles TIR domain profile. 37 202 IPR000157 GO:0007165
Tpr2g0240 1133 Gene3D - 200 366 IPR027417 -
Tpr2g0240 1133 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 45 1048 - -
Tpr2g0240 1133 Pfam TIR domain 39 200 IPR000157 GO:0007165
Tpr2g0240 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 467 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0240 Tpr-Chr2 3109838 3126897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0240 37 762 WRKY Transcription Factor Family AT4G12020 31.509 6.42e-89 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0240 - - cam:101512894 1539.63