Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0239 ATGTCTTCTTCCTTTAGCTTCCCCAATCTTCTAAATGACACATACACAAAGAATCCATCGAAAACAATAAGGATCCATGACGTGTTCTTAAGTTTCAGGGGCGAAGACACACGTGTTTCCTTCACTTCACATCTTAACACTTCTCTTCTAAATGCTGGAATTAAAGTTTTTAGGGACGATGATTCGCTTCAAAGAGGAGATATCATTTCAACATCAATAAGTAGAGCAATTGAACAATCACAAATTGCCGTGATTGTTTTCTCAAAGAATTATGCAGATTCGCGTTGGTGTCTGGACGAGTTGGTGAAGATAATGGAGTGTTCCAAATCAACAGGACAGGTTATTTTGCCAGTGTTTTACGGTGTAGATCCTTCGGAAGTCCGTCACCAAAATGGTGAGTTTGGTAGAGCATTTCAAAGTCTCTTGACTAGACTTTCAAATATGAAAGGACTTTTCAAAGTGTTAAACTTTAAATCTGGATCGCTGAATCTGGAGCAAGAACGGAGTTGGACAGCGGCGCTTCATGAGGTAGCAGGCTTTGCAGGGTTTGTCGTACTAAATTCCAGGAACGAAAGTGAGGCTATCAAGGATATTGTTGAAAAAGTTGTGCGCTTGCTAAACAAGACAGACTTGTTTGTGGCTAATAATCCAGTGGGTGTTGAACCTCGAGTGGAAGATATGATTCAACTGCTAGAGAAAAGAATACCGCAACACACTAGTGAACTGCTACAGTTTCAACAAATGCAAGCTCCGATTCAACTGTTACAGTTCCAACCGGGGCAAGCTCCGCTTCAACCGCTGCACGTCCAACCAATGCAAGCTCCAGTTCAGCCGCTACAGTTCCAACCAGTGCAAGCTCCGTTTCATCCGCTACAGTTCCAACCAATGCAAGCTTTGGTTCAACAGCAACAGTTCCAACCAGTGCAAGCTCCAGTTCAACAGCAACAGTTCCAACAAATGCAAGCTCCAAACCTGCAATCAAAGGATGTTCTACTAATAGGGATGTGGGGTATGGGAGGCATTGGCAAAACCACCATTGCAAAAGCCATTTTCAATAAAATTGGCCGCAACTTTGATGGTAGGAGCTTCCTTGCAAATATTCGGGAAGCTTGGGAGCAAAATATTGGACAAGTGTCTTTACAAGAACGAATTCTCTTTGATATTTGCAAAGAAACTACGAACAAGATACAAAGCATTGAGGAAGGAAAAAATAAGTTAAAGGATAGACTCTACCATAAAAAAGTACTTCTTGTACTTGATGATGTGAATACATTGGATCAGTTGAATGCTTTGTGTGGAAGTCGTCAGTGGTTTGGTTCGGGTAGTAGAATAATTATCACAACTAGAGATATGCATATTCTTAGAGGGAATAGAGTTGATCAAGTATATACAATGAAAGAAATGGGTGAAAGTGAAGCAATTGAGCTTTTTAGTTGGCATGCTTTCAAACAAGCGAGCCCCAATGTAGATTTTGCTGAAATTTCAAGAAACGTAGTGGATTATTCCGGGGGATTGCCGCTAGCTCTTGAAGTCCTTGGTTCATATTTGTTTGATAGGGGGATAACAGAATGGGAGAGTGTGTTGGAAAAACTCAAAAAAATTCCTAATGATCAAGTACATAAGAAGTTAAAAATAAGCTATGATGCTTTAAATGATGACACTGAGAAAGAAATATTTCTTGACATAGCTTGTTTCTTTATAGGAATGGTCAGGAATGATGTTATACATATATTAAATGGGTGTGAACTTTATGCAGAAATTGGAATAAATGTTCTTGTCGAGCGTAGCCTTGTGACTGTTGATGATATGAACAGGCTTGGAATGCATGATTTGTTGCGTGATATGGGAAGAGAAATCATTCGTGAGAAATCACCAAAGGATCCTGAGGAGCGTAGCAGGTTATGGTTTAGTAAGGACGTACTTGATGTATTATCAGAACAAACGGGAACAAAAGTTGTTGAAGGACTGACGTTGAAGTTGCAAAAAGCTGATGCAAAATGTTTTACTACAAAAGCATTTAAAAATATGACAAGGCTGAGATTGCTTCAACTTGTTGGAGTACAACTTGATGGGGATTTTGAATACCTTTCAAGAAATTTGAGATGGATTTCTTGGAATGGATTTCCTTTAACATGCATACCTACAAGCTTTTATCTAGGAAATTTAGTTTCCATTGAGTTAGTTAACAGCAATGTCGAATTTCTATGGATAAAGGCTCAGAGGATGGAGAAGTTGAAAATTCTAAACCTTAGTCATTCTCATTCCCTGAGACAGACCCCAGACTTTTCGAACATGCCTAATCTTGAAAAGCTAATACTCACTGATTGTCCAATGCTGTCTGAGATTTCTCCTAGCATTGGACATCTCAATGAAGTCCTTCTGATAAATTTGGAAGACTGTATTAACATACGGACCCTCCCAAGAAGCATATACAAGTTAAAATCTTTGAACACCCTTATTCTTTCTGGGTGTTTAAAGATTGACAAGTTGGAAGATGAGTTAGAAGATATGAAATCTTTAACCACCCTAATTGCAAATAATACGGCAATAGCACGAGTTCCCTTTTCAGTAGTAAGGTCGAAAAGCATTGGATATATTTCTTTGTGCGGTTATGAAGGATTCTCACATGATGTGTTTCCAGCTATCATTTGGTCTTGGATGTCACCGACAAATAATCTCCCATCTCCATTTCAATCACCTGCTGGCATTTCATCTCTTGTTCCTTTAGATGTACAAAATAGTAGTTCTCATGAACTATCATCTATATCCAATTACCTTCAATGGCTTCGATGTCTTTTGGTGGAGTGCGACTCAGAACTTCAACTTTCTCGAGACACAAAAATAATTCTGGATGCCTTATATGCCTCAAATTCTGAAGAGTTGGAATCAACTGATACTTCACAAGTTTCGAATGTGAAAACTTCTACACTAATTCAATGCTACAGTCAAGTATCGAATGTGAAATCTCTGTTTATTCAAATTGGAATGAATTGCCAAGTCACTAAGATTCTGAAAGACATCATTTTACAGAATATGGCTGTCAAAGGGTGTGGTGGTCAATTGCTCCCCGGTGATAGTTATCCAGATTGGCTGACCTTCAATTTCAAAGGTTCTTCTGTAATTTTTGAAGTCCCTCGGGTGCAAGGGCGTAACTTGAAGACAATAGTGTGTGTTATATATTCTTCAACACCTGATAACATAGCCTCAGATGGCCTTAAAAATGTGTTGGTAAAAAATTACACCAAGGCCACCATTCAACTCTATAAGAGAGAGGCGTTAGTCTCTTTTGAAGATGAGGATGGCGAGAGGGTAGTCTCAAGTATAGAACCTGGTAATAAAGTAGAGGTTGTTGTTGTTTTTGAGAACAGTTTTGTTGTGAAGGAAACAATAGTTTATCTTGTATATGATGAACCAATTGGAGAAAAAATTGAGAAATGTCAAGAACAAGAAAAAAATGATATTGTTTACAGTGGTGATGATAATGAAGGCATTGTGTGGACAAGCTCTCCACCAGTGGAACTCGTGGATGAAAATGGCAGCGCTGCTAGTTGTTGTGGATTGATCAAATATAGTTTCAGACAGTGGATTACAGATTTGGTGCATAAATTAGTGGAGTGCAGGTGA 3624 0.388 MSSSFSFPNLLNDTYTKNPSKTIRIHDVFLSFRGEDTRVSFTSHLNTSLLNAGIKVFRDDDSLQRGDIISTSISRAIEQSQIAVIVFSKNYADSRWCLDELVKIMECSKSTGQVILPVFYGVDPSEVRHQNGEFGRAFQSLLTRLSNMKGLFKVLNFKSGSLNLEQERSWTAALHEVAGFAGFVVLNSRNESEAIKDIVEKVVRLLNKTDLFVANNPVGVEPRVEDMIQLLEKRIPQHTSELLQFQQMQAPIQLLQFQPGQAPLQPLHVQPMQAPVQPLQFQPVQAPFHPLQFQPMQALVQQQQFQPVQAPVQQQQFQQMQAPNLQSKDVLLIGMWGMGGIGKTTIAKAIFNKIGRNFDGRSFLANIREAWEQNIGQVSLQERILFDICKETTNKIQSIEEGKNKLKDRLYHKKVLLVLDDVNTLDQLNALCGSRQWFGSGSRIIITTRDMHILRGNRVDQVYTMKEMGESEAIELFSWHAFKQASPNVDFAEISRNVVDYSGGLPLALEVLGSYLFDRGITEWESVLEKLKKIPNDQVHKKLKISYDALNDDTEKEIFLDIACFFIGMVRNDVIHILNGCELYAEIGINVLVERSLVTVDDMNRLGMHDLLRDMGREIIREKSPKDPEERSRLWFSKDVLDVLSEQTGTKVVEGLTLKLQKADAKCFTTKAFKNMTRLRLLQLVGVQLDGDFEYLSRNLRWISWNGFPLTCIPTSFYLGNLVSIELVNSNVEFLWIKAQRMEKLKILNLSHSHSLRQTPDFSNMPNLEKLILTDCPMLSEISPSIGHLNEVLLINLEDCINIRTLPRSIYKLKSLNTLILSGCLKIDKLEDELEDMKSLTTLIANNTAIARVPFSVVRSKSIGYISLCGYEGFSHDVFPAIIWSWMSPTNNLPSPFQSPAGISSLVPLDVQNSSSHELSSISNYLQWLRCLLVECDSELQLSRDTKIILDALYASNSEELESTDTSQVSNVKTSTLIQCYSQVSNVKSLFIQIGMNCQVTKILKDIILQNMAVKGCGGQLLPGDSYPDWLTFNFKGSSVIFEVPRVQGRNLKTIVCVIYSSTPDNIASDGLKNVLVKNYTKATIQLYKREALVSFEDEDGERVVSSIEPGNKVEVVVVFENSFVVKETIVYLVYDEPIGEKIEKCQEQEKNDIVYSGDDNEGIVWTSSPPVELVDENGSAASCCGLIKYSFRQWITDLVHKLVECR* 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0239 1207 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 304 1134 IPR044974 GO:0006952
Tpr2g0239 1207 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 33 234 IPR044974 GO:0006952
Tpr2g0239 1207 PRINTS Disease resistance protein signature 332 347 - -
Tpr2g0239 1207 PRINTS Disease resistance protein signature 409 423 - -
Tpr2g0239 1207 PRINTS Disease resistance protein signature 502 516 - -
Tpr2g0239 1207 PRINTS Disease resistance protein signature 740 756 - -
Tpr2g0239 1207 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 33 234 - -
Tpr2g0239 1207 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 304 1134 - -
Tpr2g0239 1207 SUPERFAMILY "Winged helix" DNA-binding domain 538 644 IPR036390 -
Tpr2g0239 1207 Gene3D Ribonuclease Inhibitor 632 1016 IPR032675 -
Tpr2g0239 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 326 562 IPR027417 -
Tpr2g0239 1207 ProSiteProfiles TIR domain profile. 24 206 IPR000157 GO:0007165
Tpr2g0239 1207 Pfam TIR domain 26 205 IPR000157 GO:0007165
Tpr2g0239 1207 Coils Coil 389 409 - -
Tpr2g0239 1207 Pfam NB-ARC domain 328 549 IPR002182 GO:0043531
Tpr2g0239 1207 Gene3D - 22 214 IPR035897 -
Tpr2g0239 1207 Gene3D - 297 462 IPR027417 -
Tpr2g0239 1207 SUPERFAMILY Toll/Interleukin receptor TIR domain 24 141 IPR035897 -
Tpr2g0239 1207 Gene3D - 468 551 IPR042197 -
Tpr2g0239 1207 SUPERFAMILY L domain-like 658 969 - -
Tpr2g0239 1207 SMART till_3 25 161 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0239 Tpr-Chr2 3094232 3101099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0239 324 817 WRKY Transcription Factor Family AT5G45050 34.933 1.52e-73 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0239 - - cam:101494533 1275.77