Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0238 ATGGCAGGACAAGTGAGTGGATCTGTGATGGGAGAGATGATGAAACACATCAACGAAACAGTCAAAAAAGGACTATTGAGTAGGTATGAAGTGTTCTTAAGTTTCAGAGGGGAAGACACACGTGCTTCATTCACTTCACATCTATATGCTTCTCTTCAAAACAACGGAATTATTGTTTTTAAGGACGATGAATCACTTCAAACTGGAGATCACATTTCAACTTCACTACCGCAATCAATCGAAGATTCTCAAATTTCTGTTATCGTTTTCTCAAAGAATTATGCAGATTCGCGATGGTGTTTGGACGAGTTGGTAAAAGTAATGGAGTGTCATAGAACCATGGGGCATATAGTGTTTCCAGTGTTCTACAATGTTGATCCTTCAGAGGTACGTCACCAGACTGGTAAGTTTGGAAAAGCTTTTCAAAGTCTCTTGAGCAGAGCTTCAGTGGAGGAAGATGTGTCGCTGAAATGGAGACATGCACTTGGTGAGGCTTCTGGACATTCTGGCTTTGTAGTTCTTAAATCCAGGAATGAAAATAAGGACATCCAGGATATTACTGAAAAAATTACTAATTTGCTTGACAAGAAAGACTTGTTCATTGCTGATAAACCAGTGGGAGTTGATTCTCGAGTGCAAGATGTTATTCAACGGCTAGACATCCAACAATCAAATGGTGTACAATTTCTTGGGATGTGGGGTATGGGGGGAATCGGAAAAACAACCATTGCAAAAGCCATTTATAATGAAATTGGTCGCAATTTCGACGGGAGGAGCTTCCTTGCGGAAGTTTGGAAGAAACCTGCTGGACAAGTGGATTTACAAGAACAACTTCTATATAATATCTACAAAGGAACAAAAACCAAGATACAAAGTATTGATTCAGGAAAAATTATATTAAAGGATAGGCTTTGTCATAATAGAGTACTTATTGTTCTTGATGATGTGGATGAGTGGGAGCAACTAGATGCTTTGTGTGGAAGTCGTGATTGGTTTGGTCAAGGGAGCAGAATAATTATCACAACTAGAGATATGCATATACTTGAAGGGAATAGAGTTGACAAAATATACTCAAATACAAAAATGAATGAAAATGAATCAATGGAGCTTTTTGAATGGCATGCATTCAAGCAAGCGATACCCACCAAAGAATTTGTTGCAATTTCCAAAAATGTCATTATGTATTCTGGGGGGTTGCCATTAGCTCTAGAAGTTCTTGGACGCTATTTGTTTGAGAGGGAGGTAAAAGAATGGAAGAGTGTATTGGAGAAACTAAAGAGAATTCCCAATGGAAAAGTACAAAACAAGTTGAAAATAAGCTATGATGGTTTAGACGATGAGTACCAGAAAGCAATATTCCTCGACATAGCATGTTTCTTTATTGGAATGGACCAAAATGATGTTATACATATATTAAATGGCTGCAATATGTTTGCAGAAAATGGAATAAGTGTCCTTGTTCAGCGAAGCCTAGTAACTATTGATGATAAAAACAAACTTAGAATGCATGATTTGTTGCGGGATATGGGAAGAGAAATCGTTTGTAATATACCACGAAAGGAGCCTGAGGAGCGTAGCAGGTTGTGGTTTCATGAGGATGTTGAGGGTGTATTAGAAGGACAAACTGGAACAAAAGCTGTTGAGGGATTGGCTTTGAAGTTGCAAGGAGATAGTGTGAAATGTTACAGTACTAAAACATTTGAGAAGATGAAGAATCTCAGATTGCTTCAACTTGCTGGTGTACAACTTGATGGGGACTTTGACTATCTTTCAAGAAATTTGAGATGGCTTTCATGGAATGGATTTCCTCTATCATACATTCCTACAGATTTTTATCAAGGAAATTTAGTTTCCATCGAATTAGAAAATAGCAATATTAAAGTTTTGTGGAAAGAGCCCCGGAGGATGAAAAACTTGAAAATTCTTAATCTTAGTCATTCTCATCATCTGACACAGACCCCAAACTTTTCATACATGCCTAATCTTGAAAAGTTAGTACTCATGGATTGTCCAAAGTTGTCTGAGATTTCTCATAGCATTGGAGATCTCAAAAATATTCTTCTGATCAATTTGGAAGACTGTATTAGCCTTCGTAGCCTTCCAAGAAGCATCTATAAGTTGAAATGTTTAGAAACTCTCATTCTTTCGGGATGCTTAATGATTGACAAGTTGGAAGAGGACTTGGAACACATGGAATCTTTAACCACTCTTGTTGCAAATAACACTGCAATAACAAGAGTGCCCTTTTCAGTGATCAGGTCAAAAAACATTGGGTATATTTCTTTGTATGGATTTTCTCGCCATGTATTTCCATCTTTCAGATGGTTTCCATCAACAAGTTCTCCTTCATCTTTTGTTTCTTTAGATATATCACATTGTAGTTCAGAGGAACTGTCATCTATTATTTCCAACCAGCTTTCATGGCTTCGAAGTCTATGGGTAGAGTGTGACTCAGAACTTCAACTTTCTAAAGATGCAAAAATCATTTTAGATGCTTTATATGCCACATTTTCGAAGGGATTGGAATCGACTTCAGCTACTTCACAAGTATCAAATACGAAAACTTCTGCATTAACTCAACGCTGCAGTCAATTGCACGCTTCCGGATCTAAACTTTCCATGAAGTTTGTTCTAATACAAATGGGTATGAATTGCCAAGTCACTAATAATCTGAAAGAAAACATTTTACAGAATATGGATGAGAGCTGGAGTGGTGGTTCTTTGCTTCATCGTGATAGTTATCCAGATTGGTTAACCTTCAATTGCAAAGGTTCTTGTGTAACTTTTGAAGTCCCTCAAGTGGAAGGGCGTATGTTGAAGACAATGATGATATGCATTGTCTATTCTTCCACCGCGCATAACATAACATCAGATGGCCTTATAAACTTGTTGATAAAAAATTACACAAAGGCCACCATTCAACTCTATACGAAAGAGGCCTTAGTCTCGTTTCAAGATGAGGAGAGGGAGAAGGTAGTATCAAGCATGAAACCTGGACACAAAGTGGAAGTTGTTGTTGTTTTTGGGAAAGGATTCATCGTGAAGGAAACAATAATTTATCTTGTATATGATCAACCAATTGGAGAAAACATGGAGAAATGTCAAGAACAAGAAAAAAATGTTATTGTTTATAGTGGTGATGATAGTGAAGGCACTGCGAGGACAACCTCTCCGCAAGTGGAACTTGTTGATGAAAATGGTGGCACTGCTTGTTGTTGTGGATTGATCAAATATGGTTTCAGAAAGTGGATTATAAATTTTATGTGCAGATTGGTCGAGTGCAGGTGA 3288 0.3756 MAGQVSGSVMGEMMKHINETVKKGLLSRYEVFLSFRGEDTRASFTSHLYASLQNNGIIVFKDDESLQTGDHISTSLPQSIEDSQISVIVFSKNYADSRWCLDELVKVMECHRTMGHIVFPVFYNVDPSEVRHQTGKFGKAFQSLLSRASVEEDVSLKWRHALGEASGHSGFVVLKSRNENKDIQDITEKITNLLDKKDLFIADKPVGVDSRVQDVIQRLDIQQSNGVQFLGMWGMGGIGKTTIAKAIYNEIGRNFDGRSFLAEVWKKPAGQVDLQEQLLYNIYKGTKTKIQSIDSGKIILKDRLCHNRVLIVLDDVDEWEQLDALCGSRDWFGQGSRIIITTRDMHILEGNRVDKIYSNTKMNENESMELFEWHAFKQAIPTKEFVAISKNVIMYSGGLPLALEVLGRYLFEREVKEWKSVLEKLKRIPNGKVQNKLKISYDGLDDEYQKAIFLDIACFFIGMDQNDVIHILNGCNMFAENGISVLVQRSLVTIDDKNKLRMHDLLRDMGREIVCNIPRKEPEERSRLWFHEDVEGVLEGQTGTKAVEGLALKLQGDSVKCYSTKTFEKMKNLRLLQLAGVQLDGDFDYLSRNLRWLSWNGFPLSYIPTDFYQGNLVSIELENSNIKVLWKEPRRMKNLKILNLSHSHHLTQTPNFSYMPNLEKLVLMDCPKLSEISHSIGDLKNILLINLEDCISLRSLPRSIYKLKCLETLILSGCLMIDKLEEDLEHMESLTTLVANNTAITRVPFSVIRSKNIGYISLYGFSRHVFPSFRWFPSTSSPSSFVSLDISHCSSEELSSIISNQLSWLRSLWVECDSELQLSKDAKIILDALYATFSKGLESTSATSQVSNTKTSALTQRCSQLHASGSKLSMKFVLIQMGMNCQVTNNLKENILQNMDESWSGGSLLHRDSYPDWLTFNCKGSCVTFEVPQVEGRMLKTMMICIVYSSTAHNITSDGLINLLIKNYTKATIQLYTKEALVSFQDEEREKVVSSMKPGHKVEVVVVFGKGFIVKETIIYLVYDQPIGENMEKCQEQEKNVIVYSGDDSEGTARTTSPQVELVDENGGTACCCGLIKYGFRKWIINFMCRLVECR* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0238 1095 ProSiteProfiles TIR domain profile. 27 194 IPR000157 GO:0007165
Tpr2g0238 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 456 IPR027417 -
Tpr2g0238 1095 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 35 1023 IPR044974 GO:0006952
Tpr2g0238 1095 PRINTS Disease resistance protein signature 229 244 - -
Tpr2g0238 1095 PRINTS Disease resistance protein signature 303 317 - -
Tpr2g0238 1095 PRINTS Disease resistance protein signature 396 410 - -
Tpr2g0238 1095 PRINTS Disease resistance protein signature 634 650 - -
Tpr2g0238 1095 Gene3D Ribonuclease Inhibitor 545 901 IPR032675 -
Tpr2g0238 1095 SMART till_3 28 168 IPR000157 GO:0007165
Tpr2g0238 1095 Pfam NB-ARC domain 210 440 IPR002182 GO:0043531
Tpr2g0238 1095 Gene3D - 26 192 IPR035897 -
Tpr2g0238 1095 Gene3D - 361 445 IPR042197 -
Tpr2g0238 1095 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 35 1023 - -
Tpr2g0238 1095 Pfam TIR domain 29 192 IPR000157 GO:0007165
Tpr2g0238 1095 SUPERFAMILY Toll/Interleukin receptor TIR domain 28 170 IPR035897 -
Tpr2g0238 1095 Gene3D - 193 356 IPR027417 -
Tpr2g0238 1095 SUPERFAMILY L domain-like 501 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0238 Tpr-Chr2 3056972 3094098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0238 29 803 WRKY Transcription Factor Family AT4G12020 29.060 2.94e-81 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0238 - - cam:101512894 1505.73