Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0237 ATGTCTTCTCCGAAAGCATCAGAATTAGAAATAGATCAGAAGGCGGGTGAATTTATCGCTAAGTTTAAGAGAAATTTGCGGCAACAGAGGACATTATTTCGTCGACATGAAGTGTTCTTAAGTTTCCGAGGAGAAGATACTCGCGCTTCCTTCACTTCACATCTCTACGCTTCTCTTCGAAATGAAGGAATCAATGTTTTCATGGATGATGATTCACTTCAAAGAGGAGATCGCATTTCAGAATCTTTAAATCAAGCAATCGAACAATCTCAAATTGCTGTGATTGTTTTTTCAAGAAATTATGGGGATTCCAGATGGTGTCTAGATGAGTTGGTGAAGATAATGGATTGTCAAAGAACCATAGGGCAGCTGGTTTTGCCGGTGTTCTATGATGTAGATCCATCTGAGCTACGTCATCAAACAGGTGAGTTTGGAAAAGCGTTTCAAAGTCTCTTCAATAGGATTTCAAAGCAGGAAGAAGATAAGTTGCGGATATGGAGAGATGCTCTTTGCGAGGCTGCTGCCCTTGCTGGCTTTGTAGTTCTAAATTCCAGGAATGAAAGGGAGGCTATCAATCGTATTGTTGAAAAAGTTAGTCTTTTGCTTGACAAGACTGACTTATTTGTTGCTGATAATCCAGTGGGAGTTGAATCTCGAGTGCAAGATATGATTCAACTTCTAAATATCAAACAATCAAATGATGTTCTACTACTAGGAATTTGGGGCATGGGGGGAACCGGTAAAACAACCAATGCAAAAGCCATTTACAACAGAATTCGTCGCAATTTCAAAGGTAGTAGTTTCCTTGCAAATATTAGGGAAACGTGGGAGCAAACTGCTGGAAGAGTATCTTTACAAGAACAACTTATGTTTGATATCTTGAAAGAAACAACAACCAAGATACAAAGCATTGAGTCTGGGAAAAATACATTAAAGGACAAGCTCTGCAACAAAAAAGTACTTCTCATACTTGATGATGTCAATAGTTTGGACCAATTAAATGCTTTGTGTGGAAGTCGTGAATGGTTTGGTTCGGGGAGTAGAATAATAATCACAACCAGAGATAAAAATATACTTAGAGGGAACAGAGTTGACAAAGTATACATAATGAAAAATATGGATGGAAGGGAATCAATTGAGCTTTTAAGTTGGCATGCATTCAAGCAAGCGAGTCCTAAAAAAGATTTTGTTGGAATTTCCAAAAATATAGTTGAGTACTCTGGGGGATTGCCACTAGCTTTAGAAGTCCTTGGTTCCTATTTGTTTGAAAGGGGAATACAAGATTGGAAGTGTGTATTGGAAAAAATCAAAATAATTCCCAATGATCAAGTACAACAAAAGTTAAAAATAAGCTATGATGGTTTAAACGACGATACTGAGAAAGAAATATTCCTTGACATAGCTTGTTTTTTTATTGGGATGGACAGAAATGATGTTATACAAATATTAAATGGTTGTGGACTTTTTGCAGAAATTGGAATAAGTGTCCTTGTCGAGCGAAGCCTTGTAACTGTCAATGATATGAACACACTTGGTATGCATGATTTGTTACGAGATATGGGAAGAGAAATCGTTCGTGAAAAATCGCCGAAGGAGCCTGAGGAGCGTAGCAGATTATGGTTTAAAGAAGATGTGCATAGTGTTTTATCTGAACAAACCGGAACAAAAGCAGTTGAGGGACTAACTTTGAAGTTGCCAATAGCTAGTTCAAAATGTTTTAGTACTAAAGCATTTAAGAAGATGAAGAGACTCAGATTACTTCAACTTGCTGGAGTACAACTTGATGGAGATTTTGAATATATTTCAAGAAATCTAAGATGGCTGTCTTGGAATGGATTTCCTTTAAAAAGCATACCTTTAAACTTATATCAAGGAAATTTAGTTTCCATTGAATTGGAAAACAGCAATGTCAGAGTTCTGTGGAGAGAGACCCAAAGGTTGGAGATGCTGAAAATCCTAAACCTTAGTCATTCTCAATATCTGACACAGACTCCAGACTTCTCAGATTTGCCTAATCTTGAAAAGCTGGTACTCACAGATTGTCCAAGGCTGTCTGAGATTTCCAATAGTATTGGAGATCTCAAAAAAATTCTTTTGATCAATTTGGAAGACTGTATTAGCCTTCGTAGCCTTCCGAGAAGCATCTATAAGTTGAAATCTTTGAAAACTCTCAATATTTCCGGGTGTTTAATGATTGACAAGTTAGAAGATGACTTGGAACAGATGGACTCCTTAACCAACCTGATTGCAAATAACACTGCAATAATAAAAGTGCCATTTTCAGTAGTAAGGTCAAAAAGCATCGGATATATTTCTCTGTGCGGTTATGAAGGATTCTCACGTGATGTGTTTCCATCTATCATTTGGTCTTGGATGTCACCAACAAATAATCTCCCATCCCATTTTCAGACATCTACCAAGTCATCTCGTGTTCCTTTAGATATACCACATAGTAGTTCCCACGAACTATCATCAATCTCCAAGTACCTTCCAAGTCTTCGAAGTCTTTGGGTGGAGTGTAGCTCAGAACTTCAACTTTCTCACGATGCAACAATAATTTTGGATGCCTTATATGCCACATATTCTGCAGAATTGGAACCAATTGCAACTACTTCACAAGTATCAAGAAATTCCTTGAAGTCTCTATTCATTCAAATGGGAATGAACTGTCAAGTGGCTAATATTCTAAAAGAGAAAATTTTACAGAATATGACAGTCAACGAGAGTGGTGGTGGTTGTGTGCTCCCCGGTGATAGTTATCCAGATTGGTTAAGCTTCGATTGTGAAGGTTCTTCTGTAATTTTTGAGGTCCCTCAAGTGGAAGGACATAAACTAAAGTCATTGATGTGCATTACCTGTTCCTCAACTCCTTTTAACATAACATCAGATGGTCTTAAAAATGTGTTGGTGAAAAATTACACAAAGGCCACCATTCAGCTCTATAAGAAAGAGACATTAGCTTCCTTTGAAGACGAGGAGGGACAAAGAGTAGTATCAAGTATAGAACCCGGAAACAAAGTGGAGATTATTGTTGTTTTTGGAAATGGCTTCGTTGTGAAGAAAACAACAGTTTATCTCATATATGATGAACTGATTGGAGAAAAAATGGAACAATGTGAAGTACTAGAAGAAAATGCTATTTTTAGTGATGGTGATGAAAATGAATGCAGTGTAAGAAGGTGCTCACCACAAGTGGAACTCATGGATGAAGAAATGGAGAAATGTCAACAAGGAGTGAAAAATGATATTGTGTTTAGTGGTGATGATAAGGAAGGCATTGTCAGGATAAGCTCTCCGCAAGTTGAACTTGTGGATGAAAATGATGGCGCTGATAGCTGTTGTGGATTGATCAAATACAGTTTCAGACAGTGGATTACAGATTTTATGTGCAGATTGGTCGAATGCAGATTCATTTTCATCTTATCCATATCCATGTCTTCCTCTTATCCCATACCATCAACGAATTCAGCAGAAGCATTATATTCATCATCAACACAAGGAAAACCATATGAAGAAGTGTTCTTAAGCTTCAGAGGAGAAGATACTCGTGCTACCTTCACTTCACATCTCTACGAAGCTCTTCGACGCGCTGGAATAACCGTTTTTAGAGACGATGATTCACTTCAAAGAGGAGATAAAATTTCAACATCAATAAATCGAGCAATCGAAGAATCTAGAATTTCAATCATTATTTTCTCAAGAAATTACGCAGATTCGCGATGGTGTTTGGATGAATTGGATAGAATAATGAAAAGTCATAGAACTACAGGGAAAGCGGTTTTACCGGTGTTCTTTGACGTTGATCCGTCGGAAGTACGTCATCAAAAAGGTGCGTTTGGAAAAGCTTTTCAGAATCTGTTGAAGAAAATGTCGAAAGAGGTTGAAGAGGTGTCAAATTCGAATTTGAAGTTTGATTGGGGAAAATCACGTCATGAGAATTCGAGATTTCAGGCTGATTGGGGAAATTCGGTTCGTGAGATTATGGAGCCAAGGTGGAGAGAAGCGCTTCGTGAGGCGGCTGGCCTTGCAGGCTTCCTAATCCTAAATTCCCGGAATGAAAGTGAGGCTATCAAACGTATTGTTGAAAATGTGATACGTTTGCTTGATAAAACAGATTTGTTTATTGCTAATAATCCAGTGGGAGTTGAATCTCGTGTAGAAGAAATGATTCAATTGCTAAACCAAGATATTGAACAATCAAATGATGTTCTACTTCTAGGAATGTGGGGTATGGGAGGGGTTGGTAAAACAACCATTGCGAAAGCCATTTACAATAAAATTGGCCGCAATTTTGAAGGTAGGAGCTTCCTTGCAAATATAAGGGAAGTTTGGGAGCAAAATGTTGGAAAAGTGGATTTACAAGAACAACTTCTCTTTGATATCAGTAAAGAAATGACAACTAAGATAAAAAACATTGAGTCAGGAAAAAATATATTAATGGATAGACTCTGCCATAAAAGAGTACTAATTGTACTTGACGATGTCAATACATTGGACCAACTAAATGCATTGTGCGGAAGTCATAAATGGTTTGGTTTGGGCAGTAGAATAATCATTACAACACGTGATAGACATATACTTTGTGGGAATAGGGTTAATCAGGTTTTCAAAATGAAACACATGGACGAAAGTGAATCAATTGAGCTGTTTAGTTGGCATGCATTCAAGCAAGTGAGTCCAACAAAAGATTTCATTGAAATTTCTAGAAATGTAGTTGAGTATTCTGGGGGATTGCCACTAGCTTTGGAAGTCCTTGGGTCATATCTGTGTGATAGGGAGTTAATAGAATGGAAAAGTGTATTGGACAAACTCAAAAGAATTCCAAATGATCAAGTACAGAAGAAGTTAAAAATAAGCTATGATGCCTTGAGTGATAATACCGAGAAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGAATGGACCGAAATGATGTTACACTTATATTAAATGGATGTGGTCTTTTTGCAGAAATTGGAATAAGTATCCTTGTTGAGCGAAGCCTTGTAACTGTTGATGATAAGAACAAACTTAGAATGCATGATTTGTTGCGAGATATGGGTAGAGAAATCATTCGTGAGAAATCACCAGAGGACCTTGAGGAGCGTTGCAGGTTGTGGTTTCATGAGGATGCCCTTCATGTATTATCAGAACAATCTGGGACAAAAGCTATTAAGGGGATGTCTTTGAAGTTGCCAAGAGCTAATGCAAAATGTTTTAGTTCTAAAGCATTCAAGAAGATGAAGAGACTCAGACTGCTTCAACTTTCTGGGGTAAACCTTGATGGGGATTTTGAATATCTTTCGAGAAATCTAAGATGGCTGTCTTGGAATGGATTTTCTTTAACATATATACCTGCAAACCTTTATAGAGAAAAATTAGTTTCCATCGAGTTAGAGAATAGCAATGTCAAACTTGTGTGGAAAGAGGCCCAGAGGATGGAAATGCTGAAAATTCTAAATCTTAGTCATTCTCATTGTCTCACGCACACGCCGGACTTTTCATACTTGCCTAATCTTGAAAAGCTAGTACTCAAAGATTGTCCAATGTTGTCTGAAGTTTCTCATAGCATCGGAGATCTCAGTGAAATTCTTCTAATAGATTTGGAAGATTGTGTTAGCCTTCGTAGCCTTCCAAGAAGCTTATATAAGTTGAAATCTTTGAAAACTCTCATTCTTTCTGGGTGTTTAATGATTGACAAGTTGGAAGAGGACTTTGAACAAATGGAATCTTTAACCACTCTGCTTGCACATAACACTGCAATAAAAAAAGTACCCTTTTCGGTAGTAAGGTCAAAAAGCATTGGATATATCTCTTTGTGCGGCTATGAAGGATTTTCACGTGATGTCTTTCCATCTATCATTTTGTCTTGGATGTCACCAACAAATAATCTCACATCTCAATTCCAAACATCTGCTGCCATGTCATCTCTTGTTTCTGTAGATGTACCAAGTAGTAGTTCACATGAACTATCATCTTTTTTGAACCAACTTCCAAGGCTTCGAAGTCTTTTGGTGGAGTGCAACTCTGAAGATCAACTTTTTCTTGATGCAAAAATGATTTTGGATGCTTTATATGCTACAAATTCTAAGGAATTGGTATCAACTACATCACATTTAACTACTTCTACATTAATCCAATGTTGCAATGAAGTGCACGTTCAAGGATCAAAACATTCCTTCAAGTCTCTTTTAATTAAAATGGGAATGAATTGCCAAGTCACCGATATTGTGAAAGAGATAATATTACAGAATATGAATATCGATGGGAGTGGTGATTGTTTCCTCCCCAGTGATAGTTATCCAAATTGGTTAACCTTTAATTCTGAAGGTTCTTCTGTTACTTTTCGAGTCCCTCATGTGGAAGGGCGTGACTTGAAGACAATGCTGTGCATTGTCTATACTTCAACCCTGGATAACATAACATCAGATGGCCTTAAAAACGTATTGGTGAAAAATTACACAAAGGCTACCATTCAGCTTTATAAGAGAGAGGCATTAATCTCCTTTGAAGATGAGGAAGGGCAAAGAGTAGTATCAAGTATCGAACCCGGTGACAAAGTGGAGGTTGTGGTTGTTTTTGAGAATAGTTTTAATGTGAAGAAGACAACAGTTTATCTCGTATATGATGAACCAGATTTGAATGCCATCGCTTGTTGTAATGATGAAAATGAACACTCTGCAAAGAGATTCTCTACCGAAAACATGCCCACTGATGACTTCAACCAGAACAGAAAGAAGAAAAATCGAGTGGAATGA 6762 0.374 MSSPKASELEIDQKAGEFIAKFKRNLRQQRTLFRRHEVFLSFRGEDTRASFTSHLYASLRNEGINVFMDDDSLQRGDRISESLNQAIEQSQIAVIVFSRNYGDSRWCLDELVKIMDCQRTIGQLVLPVFYDVDPSELRHQTGEFGKAFQSLFNRISKQEEDKLRIWRDALCEAAALAGFVVLNSRNEREAINRIVEKVSLLLDKTDLFVADNPVGVESRVQDMIQLLNIKQSNDVLLLGIWGMGGTGKTTNAKAIYNRIRRNFKGSSFLANIRETWEQTAGRVSLQEQLMFDILKETTTKIQSIESGKNTLKDKLCNKKVLLILDDVNSLDQLNALCGSREWFGSGSRIIITTRDKNILRGNRVDKVYIMKNMDGRESIELLSWHAFKQASPKKDFVGISKNIVEYSGGLPLALEVLGSYLFERGIQDWKCVLEKIKIIPNDQVQQKLKISYDGLNDDTEKEIFLDIACFFIGMDRNDVIQILNGCGLFAEIGISVLVERSLVTVNDMNTLGMHDLLRDMGREIVREKSPKEPEERSRLWFKEDVHSVLSEQTGTKAVEGLTLKLPIASSKCFSTKAFKKMKRLRLLQLAGVQLDGDFEYISRNLRWLSWNGFPLKSIPLNLYQGNLVSIELENSNVRVLWRETQRLEMLKILNLSHSQYLTQTPDFSDLPNLEKLVLTDCPRLSEISNSIGDLKKILLINLEDCISLRSLPRSIYKLKSLKTLNISGCLMIDKLEDDLEQMDSLTNLIANNTAIIKVPFSVVRSKSIGYISLCGYEGFSRDVFPSIIWSWMSPTNNLPSHFQTSTKSSRVPLDIPHSSSHELSSISKYLPSLRSLWVECSSELQLSHDATIILDALYATYSAELEPIATTSQVSRNSLKSLFIQMGMNCQVANILKEKILQNMTVNESGGGCVLPGDSYPDWLSFDCEGSSVIFEVPQVEGHKLKSLMCITCSSTPFNITSDGLKNVLVKNYTKATIQLYKKETLASFEDEEGQRVVSSIEPGNKVEIIVVFGNGFVVKKTTVYLIYDELIGEKMEQCEVLEENAIFSDGDENECSVRRCSPQVELMDEEMEKCQQGVKNDIVFSGDDKEGIVRISSPQVELVDENDGADSCCGLIKYSFRQWITDFMCRLVECRFIFILSISMSSSYPIPSTNSAEALYSSSTQGKPYEEVFLSFRGEDTRATFTSHLYEALRRAGITVFRDDDSLQRGDKISTSINRAIEESRISIIIFSRNYADSRWCLDELDRIMKSHRTTGKAVLPVFFDVDPSEVRHQKGAFGKAFQNLLKKMSKEVEEVSNSNLKFDWGKSRHENSRFQADWGNSVREIMEPRWREALREAAGLAGFLILNSRNESEAIKRIVENVIRLLDKTDLFIANNPVGVESRVEEMIQLLNQDIEQSNDVLLLGMWGMGGVGKTTIAKAIYNKIGRNFEGRSFLANIREVWEQNVGKVDLQEQLLFDISKEMTTKIKNIESGKNILMDRLCHKRVLIVLDDVNTLDQLNALCGSHKWFGLGSRIIITTRDRHILCGNRVNQVFKMKHMDESESIELFSWHAFKQVSPTKDFIEISRNVVEYSGGLPLALEVLGSYLCDRELIEWKSVLDKLKRIPNDQVQKKLKISYDALSDNTEKEIFLDIACFFIGMDRNDVTLILNGCGLFAEIGISILVERSLVTVDDKNKLRMHDLLRDMGREIIREKSPEDLEERCRLWFHEDALHVLSEQSGTKAIKGMSLKLPRANAKCFSSKAFKKMKRLRLLQLSGVNLDGDFEYLSRNLRWLSWNGFSLTYIPANLYREKLVSIELENSNVKLVWKEAQRMEMLKILNLSHSHCLTHTPDFSYLPNLEKLVLKDCPMLSEVSHSIGDLSEILLIDLEDCVSLRSLPRSLYKLKSLKTLILSGCLMIDKLEEDFEQMESLTTLLAHNTAIKKVPFSVVRSKSIGYISLCGYEGFSRDVFPSIILSWMSPTNNLTSQFQTSAAMSSLVSVDVPSSSSHELSSFLNQLPRLRSLLVECNSEDQLFLDAKMILDALYATNSKELVSTTSHLTTSTLIQCCNEVHVQGSKHSFKSLLIKMGMNCQVTDIVKEIILQNMNIDGSGDCFLPSDSYPNWLTFNSEGSSVTFRVPHVEGRDLKTMLCIVYTSTLDNITSDGLKNVLVKNYTKATIQLYKREALISFEDEEGQRVVSSIEPGDKVEVVVVFENSFNVKKTTVYLVYDEPDLNAIACCNDENEHSAKRFSTENMPTDDFNQNRKKKNRVE* 2254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0237 2253 Pfam Cotton fibre expressed protein 10 30 IPR008480 -
Tpr2g0237 2253 ProSiteProfiles TIR domain profile. 1169 1368 IPR000157 GO:0007165
Tpr2g0237 2253 SUPERFAMILY L domain-like 1730 2076 - -
Tpr2g0237 2253 SUPERFAMILY Toll/Interleukin receptor TIR domain 35 178 IPR035897 -
Tpr2g0237 2253 Gene3D - 1366 1535 IPR027417 -
Tpr2g0237 2253 Gene3D - 201 367 IPR027417 -
Tpr2g0237 2253 SUPERFAMILY "Winged helix" DNA-binding domain 443 549 IPR036390 -
Tpr2g0237 2253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1373 1635 IPR027417 -
Tpr2g0237 2253 SMART till_3 1170 1342 IPR000157 GO:0007165
Tpr2g0237 2253 SMART till_3 35 176 IPR000157 GO:0007165
Tpr2g0237 2253 MobiDBLite consensus disorder prediction 2230 2253 - -
Tpr2g0237 2253 SUPERFAMILY "Winged helix" DNA-binding domain 1611 1717 IPR036390 -
Tpr2g0237 2253 SUPERFAMILY Toll/Interleukin receptor TIR domain 1161 1286 IPR035897 -
Tpr2g0237 2253 Gene3D Ribonuclease Inhibitor 560 888 IPR032675 -
Tpr2g0237 2253 Gene3D Ribonuclease Inhibitor 1718 2057 IPR032675 -
Tpr2g0237 2253 SUPERFAMILY L domain-like 563 847 - -
Tpr2g0237 2253 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 1176 2209 - -
Tpr2g0237 2253 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 42 1028 - -
Tpr2g0237 2253 Pfam TIR domain 36 198 IPR000157 GO:0007165
Tpr2g0237 2253 Pfam TIR domain 1173 1293 IPR000157 GO:0007165
Tpr2g0237 2253 ProSiteProfiles TIR domain profile. 34 202 IPR000157 GO:0007165
Tpr2g0237 2253 Pfam NB-ARC domain 217 438 IPR002182 GO:0043531
Tpr2g0237 2253 Pfam NB-ARC domain 1383 1623 IPR002182 GO:0043531
Tpr2g0237 2253 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 42 1028 IPR044974 GO:0006952
Tpr2g0237 2253 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1176 2209 IPR044974 GO:0006952
Tpr2g0237 2253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 467 IPR027417 -
Tpr2g0237 2253 PRINTS Disease resistance protein signature 1405 1420 - -
Tpr2g0237 2253 PRINTS Disease resistance protein signature 1482 1496 - -
Tpr2g0237 2253 PRINTS Disease resistance protein signature 1575 1589 - -
Tpr2g0237 2253 PRINTS Disease resistance protein signature 1884 1900 - -
Tpr2g0237 2253 SMART AAA_5 234 374 IPR003593 -
Tpr2g0237 2253 SMART AAA_5 1402 1542 IPR003593 -
Tpr2g0237 2253 Gene3D - 1170 1365 IPR035897 -
Tpr2g0237 2253 Gene3D - 33 200 IPR035897 -
Tpr2g0237 2253 Gene3D - 373 456 IPR042197 -
Tpr2g0237 2253 Gene3D - 1540 1624 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0237 Tpr-Chr2 3036561 3051042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0237 43 762 WRKY Transcription Factor Family AT4G12020 31.030 1.19e-84 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0237 - - cam:101512894 1627.07