Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0218 ATGTTGTTCTTCCCTTTCCTTAAACCTTGTCCATGCATGCTTTTCTTCCTCTTCTTTACGCTGTTCTACACTTCAACAGAAGCATACGATCCACTTGACCCATTTGGAAATATCACAATCAAATGGGATATTAGAGAATGGACACCTGATGGTTATGTTGCTGTTGTTACGATGAACAATTTCCAGCAATATCGTCATATATCGGCACCAGGATGGTCCTTAGGATGGACCTGGGCTAAGAAGGAGGTAATATGGCAAGTGATGGGAGGACAGACAACTGAACAAGGAGACTGTTCAAAGTTTAAGGGAAACACCCCACATTGCTGTAAAAAAGATCCAACGGTTGTAGATTTACTTCCTGGGACGCCATATAATCAGCAAATTGCGAATTGTTGTAGAGGTGGTGTACTCAGCTCATGGGCACAAGATCCAACAAATGCAGTTTCGGCGTTTCAAGTCAGTGTCGGTAGTGCTGGCACTACTAACAAAACGGTCAGACTACCGCTAAATTTTACCTTGAAAGCACCAGGACCAGGCTATACATGCGGACCAGCAAAAACCGTGACTCCTACTAAATTTACAACACCGGACAAAAGGAGAGTGACTCAAGCACTTATGACATGGAATGTGACATGCACATACTCACAATTTCTTGCTCAGAAAACTCCAACTTGCTGTGTCTCCCTCTCGTCTTTCTATAATGATACTATTGTACCCTGTCCGACATGTTCGTGCGGATGCCAAGGCAACTCAGCTCAATCAGGAAGCTGTGTAGATCCAAGAGCACCACGTTTAGCTTCAGTTGTTAAAGGCGCCGGAAATAAAAGTATTACTCCTTTGGTTCAATGTACAAGTCATATGTGTCCGATACGAGTTCACTGGCACATTAAAGTTAACTACAAGGAGTATTGGAGGGTGAAGGTTACTGTTACTAATTTCAATTACAGGATGAATTACTCAGATTGGAACTTGGTCGTGCAACATCCAAACTTTGACAATCTGACCCAACTGTTCAGTTTCAACTACAAATCAATAAATCCATACGGGTCGATAAATGATACAGCAATGCTTTGGGGCGTTAAATTCTACAACGATTTCCTCAACCAAGCTGGCCCTAATGGTAATGTGCAATCAGAGCTACTTTTCCGAAAAGATGATTCTTTTATGTTTGACAAGGGTTGGGGATTTCCTCGGAGGATCTATTTCAATGGTGATAACTGTGTCATGCCACCACCTGATGCTTATCCATGGTTACCCAATGCTGGTTCGAAGCTCGAGGTTTCCTTGGTTTCCTACCTTACTTTGATGATTGCTTCGTTGGTAGTCTTGGTACTTCACGCATATTGTTAA 1350 0.4252 MLFFPFLKPCPCMLFFLFFTLFYTSTEAYDPLDPFGNITIKWDIREWTPDGYVAVVTMNNFQQYRHISAPGWSLGWTWAKKEVIWQVMGGQTTEQGDCSKFKGNTPHCCKKDPTVVDLLPGTPYNQQIANCCRGGVLSSWAQDPTNAVSAFQVSVGSAGTTNKTVRLPLNFTLKAPGPGYTCGPAKTVTPTKFTTPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCSCGCQGNSAQSGSCVDPRAPRLASVVKGAGNKSITPLVQCTSHMCPIRVHWHIKVNYKEYWRVKVTVTNFNYRMNYSDWNLVVQHPNFDNLTQLFSFNYKSINPYGSINDTAMLWGVKFYNDFLNQAGPNGNVQSELLFRKDDSFMFDKGWGFPRRIYFNGDNCVMPPPDAYPWLPNAGSKLEVSLVSYLTLMIASLVVLVLHAYC* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0218 449 PIRSF COBRA 2 448 IPR006918 GO:0010215|GO:0031225
Tpr2g0218 449 Pfam COBRA-like protein 52 215 IPR006918 GO:0010215|GO:0031225
Tpr2g0218 449 PANTHER PROTEIN COBRA 7 447 IPR006918 GO:0010215|GO:0031225
Tpr2g0218 449 PANTHER COBRA-LIKE PROTEIN 7 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0218 Tpr-Chr2 2875505 2879506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0218 6 447 COBRA Gene Family AT3G02210 73.874 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0218 - - gmx:100783820 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0218 2 2875505 2879506 Tpr2g0218 2 2875505 2879506 ECH
Tpr2g0218 2 2875505 2879506 Tpr6g3022 6 32875180 32879368 PCT
Tpr6g3021 6 32867068 32875103 Tpr2g0218 2 2875505 2879506 PCT