Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0217 ATGAGGCTTATTTTTTCATTTCTTTGTGTTCTTGTGCTATCTTCTTATGCAATTGCTTATGATCCTTTGGATCCAAATGGAAACATAACAATAAAATGGGATGTTATGTCTTGGACACCAGATGGTTATTTGGCGACAGTAACAATCAACAACTTCCAAACGTTTCGACACATAATGAATCCGGGCTGGACCTTAGGCTGGACATGGGCTAAGAAAGAAGTGATATGGTCAATGGTAGGAGCTCAAACAACAGAACAAGGTGATTGTTCTAAGTTCAAAGGAAACATACCGCATTGCTGCAAGAAAATCCCTACGGTTGTAGACCTTCTCCCCGGTGTACCTTACAATCAGCAATTCACAAACTGTTGTAAAGGCGGAGTTGTTTCAGCGTGGGGACAAGATCCTACACAATCAGTATCGGCTTTTCAAGTTAGTGTAGGACAAGCTGGAACCTCGAACAAAACAGTTAAACTTCCGAAGAATTTCACTCTTTTGGCTCCTGGACCTGGATATACTTGTGGCCGTGCCAAGATTGTTCCTCCTACCAATTTTCTTACTCCTGATAGGCGCCGCAAGACTCAAGCTTTGATGACATGGAATGTTACGTGTACTTACTCGCAGTTTCTAGCAAGCAAGAATCCAAGTTGTTGTTTATCTTTATCTTCCTTCTACAATGAAACCATTACACCTTGTCCTCATTGTGCATGTGGCTGCCAAAAGAAGAAGAATTGTGTGAAGAATGAAGCTAAGATTCTGAGTATGGTAGGAGTTCACACTCCAAAGAAAGACAATGAACCATTGATGCAATGCACTCATCATATGTGCCCAATTAGAGTTCACTGGCATGTGAAGAATAACTATAAGGACTATTGGCGAGTCAAAATCGCGATAACGAATTTTAATTACAGGATGAATTACTCTCTATGGAGTCTTGCTATTCAACATCCAAATCTCAACAATATCACTCAAGTTTTCAGTTTTAATTATAAGCCACTTCAACCCTATGGATCCATAAATGACACCGGAATGTTCTATGGAATGAAATACTTCAATGATCTACTAATGGAAGCTGGAGCAAAGGGAAATATTCAATCAGAGGTATTGCTTCAGAAAAACCAAGAAACCTTCACATTCAAGCAAGGATGGGCATTTCCTCACAAGGTTTACTTTAATGGCGATGAATGCAGGCTTCCTCCACCTGATACGTACCCTTTTCTCCCTAACTCTGCGCCTACGAGCTTAGTTAACTTCAAGGCACTCATATTTTCATTATTTTTACTGCTAGCACTTTTGTGA 1296 0.4012 MRLIFSFLCVLVLSSYAIAYDPLDPNGNITIKWDVMSWTPDGYLATVTINNFQTFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKIPTVVDLLPGVPYNQQFTNCCKGGVVSAWGQDPTQSVSAFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGRAKIVPPTNFLTPDRRRKTQALMTWNVTCTYSQFLASKNPSCCLSLSSFYNETITPCPHCACGCQKKKNCVKNEAKILSMVGVHTPKKDNEPLMQCTHHMCPIRVHWHVKNNYKDYWRVKIAITNFNYRMNYSLWSLAIQHPNLNNITQVFSFNYKPLQPYGSINDTGMFYGMKYFNDLLMEAGAKGNIQSEVLLQKNQETFTFKQGWAFPHKVYFNGDECRLPPPDTYPFLPNSAPTSLVNFKALIFSLFLLLALL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0217 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Tpr2g0217 431 PANTHER COBRA-LIKE PROTEIN 6 429 - -
Tpr2g0217 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Tpr2g0217 431 PANTHER PROTEIN COBRA 6 429 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0217 Tpr-Chr2 2870229 2873498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0217 19 431 COBRA Gene Family AT3G29810 65.144 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0217 - - gmx:100798678 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0217 2 2870229 2873498 Tpr6g3021 6 32867068 32875103 PCT