Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0201 ATGACAGTTGGAACTCTTGTACCTAAGGCAGAGAGTAACAAACCAAGGAAGAAGAAGGAAATTGTTGATGAGAATGCGCCTTTGTTACCTAAGACTCAAGAAACAGATGCTGAGATCCATGAATTTAACGGAGCTTCATTTTCTGGGGCTGTTTTCAATTTGTCCACCACAGTTATTGGTGCTGGGATCATGGGCTTGCCTGCCTGTGTCAAAAAGTTGGGAATGGTGCCTGGCCTTCTTGCCATAATCCTAACAGCATTATTGACAGAGAAGGCAATTGAGTTCATGATCAGGTTTTCGAGGGCAGGGAATATTTCTTCCTATGGAAGTCTTATGGGGGATGCCTTTGGGAAATATGGAAAAGCTTCGGTAGAGTTATGTATTGTAATCGGTAACATTGGTATTCTTATTGTTTACATGATAATTATTGGTGATGTGATTTCTGGAACAACTTCAAGTGGAATTCACCATGCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGGCGTACATTTGTTATTGTTTTCACAACACTTGCTGTGTTTGCACCTTTGGTCAGCCTCAAGCGAATTGATTCATTGAGATTCACATCTGCTTTGTCAATTGGATTAGCAGTTGTTTTCCTTGTCATTGCTGCAGGGATCTCAATTATCAAGATTATTAGTGGAGGCATTGGGATGCCCAGACTCTTCCCCATCATTACTGATGTAGCCTCAGTTCTTGATCTATTCACTGTAGTTCCTGTGCTGATGACAGCCTACATCTGTCACTACAATGTTCATAACATAGATAATGAACTGGAGGATTCCTCACAGATGCGTGGGGTTGTGCGCGCTTCCCTTACTCTATGCTCTTCAGTGTACTTACTGACAAGCTTCTTTGGGTTCCTTCTATTTGGCGAAGAAATTCTTGATGACGTGCTTGCCAATTTTGATACTGATCTTGGAATTCCTTTCGGTTCTGCGCTCAATGATGCTGTTCGTTTTAGCTATGCTGCGCATCTTGTGCTTGTATTTCCTGTAGTGTTCTATGCAGTGAGGGTCAATATAGATGGTCTCATATTTTCGTCTTCAAGAAGGCCTTTGCTTGTTGATAACTTCAGATTTGCATCGATTACTATTGCCCTTGTTTGCACTATCTTCTTGGGAGCAAATTTCATACCTAACATTTGGGTAATTTTCCAGTTCGCTGGAGCAACAAGTTCTGTTTGTATAGCATTCATATTTCCAGCTGCAATCACTCTGAGGGATCGTTACAACATAGCAACTAAAAAAGACAGGATTATGTCTCTCATTATGATAGTCCTTGCAGTCTTGTCAAATGCTATAGCTATATACAGTGATGCCTATGCTTTGATCAACAAGAAAAAAACTTAA 1386 0.4098 MTVGTLVPKAESNKPRKKKEIVDENAPLLPKTQETDAEIHEFNGASFSGAVFNLSTTVIGAGIMGLPACVKKLGMVPGLLAIILTALLTEKAIEFMIRFSRAGNISSYGSLMGDAFGKYGKASVELCIVIGNIGILIVYMIIIGDVISGTTSSGIHHAGILEGWFGVHWWTGRTFVIVFTTLAVFAPLVSLKRIDSLRFTSALSIGLAVVFLVIAAGISIIKIISGGIGMPRLFPIITDVASVLDLFTVVPVLMTAYICHYNVHNIDNELEDSSQMRGVVRASLTLCSSVYLLTSFFGFLLFGEEILDDVLANFDTDLGIPFGSALNDAVRFSYAAHLVLVFPVVFYAVRVNIDGLIFSSSRRPLLVDNFRFASITIALVCTIFLGANFIPNIWVIFQFAGATSSVCIAFIFPAAITLRDRYNIATKKDRIMSLIMIVLAVLSNAIAIYSDAYALINKKKT* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0201 461 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 460 - -
Tpr2g0201 461 Pfam Transmembrane amino acid transporter protein 45 449 IPR013057 -
Tpr2g0201 461 PANTHER AMINO ACID TRANSPORTER 7 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0201 Tpr-Chr2 2612481 2619737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0201 12 459 Amino Acid or Auxin Permease AAAP Family AT5G38820 63.556 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0201 K14207 - gmx:100791286 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0201 2 2612481 2619737 Tpr6g2982 6 32368108 32373120 PCT