Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0195 ATGTCAATGACCTTCTTGACAAACATGAACAACATTGAGACACTTCTCAATGCACCAAACAAAAATAGCACATACAACAAAAGATGGCACAATGCTTTCATGAAATCCAACAAACCAAAAATTGCACCTACCCCATCTTTCACTTTGGTTGATTTGAATTTATCACCTCATCACTCTTATACCATTGATCAAGAAACTCTCATAGATATTGTCAAAGAAAAAAACATTGAAACCCTTCAAAACCATGGTGGAGTTGAAGTAGTTGCTTCAAATCTTAAAACCAACATTGAGTTTGGTATCAAAAGTGATGATTTTGAAGACATTGCAAGTAGAAAACAAGTGTTTGGTTCCAACACTTACAAAAAACCACCTTCTAAAAGTTTCTTTCATTTCATTGCTGAAGCTTTTAAGGATGTAACAATTCTAATACTTTTGGTTTGTGCTACTCTTTCACTTGCCTTTGGAATCAAGCAACATGGAATCAAAGAAGGTTGGTATGATGGTGGTAGCATTTTTCTAGCTGTTTTCATTGTTATTTCAATGTCATCAATAAGCAATTTCAAACAAAACAAACAATTTGACAAATTGTCTCAAGTGAGCAATGACATTCAAATTGATTTGGTTCGTAGTGGGCGCCGACAAAAGGTGTCCATCTTTGATATTGTTGTTGGTGATGTTGTTTGTTTGAAGATCGGTGATCAGGTACCGGCTGATGGATTGTTTATAGATGGACATTCATTGAGAGTCGATGAATCAAGCATGACCGGTGAGAGTGATCATGTAGAGATTAATAAAGACCATCATCCATTTTTATTTTCCGGAACAAAAGTTGCTGATGGTTATGCGAAAATGCTTGTTACATCGGTCGGTATGAACACAACTTGGGGACAAATGATGAGTTCGATAAGCAATGATATCGACGAAGAAACACCTTTGCAAACAAGGTTGAATAAGTTGACATCATCGATTGGAAAGGTTGGTTTGGTTGTGGCGTTTTTAGTCCTTATTGTTTTGTTGATTCGATATTTCACCGGGAATACAAAGACCGATAACGGTGTTAAAAAGTTTAACGGACGGAAGACTAGTTTTGATGATGTGATGAATGCAATTATTGGAATTATTGCTGATGCTGTTACTATTGTTGTTGTTGCTATCCCTGAGGGTTTGCCATTAGCTGTGACATTGACTCTTGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCTATGGTTAGAAAACTTTCTGCTTGTGAAACAATGGGATCTGCTACTACTATCTGCACTGATAAAACAGGTACACTAACTTTGAATCAGATGAAGGTGACAAAGTTTTGGCTTGGTCTAGAGCCTTTGGAAGATAATGCATATTCAAATGTTGATCCATTTGTTCTTCAATTGATCAAAGAAGGAGTAGCTCATAATACAACCGGTGGTGTTCACAAATCTAAATCAGGTTCTGATTCAAAATTCGAGTTTTCTGGTAGTCCAACTGAAAAGGCAATATTATCTTGGGCTGTTTTGGAATTGAATATGGTTATGGAAAATTTGTCAAAAAGTTGCTCTATTATTCAAGTGGAGACATTCAACTCGAAGAAGAAAAGAAGTGGCGTTTTATTGAGAAGAAATGTCGACAACAAAGTTAGTGCACATTGGAAAGGAGCTGCAGAGATGGTATTAAGAATGTGTTCTAGATACTATGATAGTTATGGAAATGTGAAAGATCTTGACAATGAAACCATGTCGAAATTTGAAAACATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGTATCGCTTTAGCATACACAGAAGTCGCGAACGAAGAGCTAGGAGGTGAAGGAGGCAACAAGATGGTGGTAAAAGATGATGGTTTAACATTGTTAGGTCTTGTTGGCATTAAGGATCCGTGTCGCCCAGGGGTGAAAACGGCGGTGGAAGCCTGCCAACATGCCGGTGTGAATGTCAAAATGATTACAGGTGACAATGTTTTCACTGCAAAAGCAATAGCATTCGAATGTGGAATTCTTCGACCTAATCAAGACACAGATGAAACTGTGGTCGAAGGTGAACAATTTCGTAATTTTTCGCCTGAAGAGAGGTTAGCGAAAGTTGACAAAATCTCTGTAATGGCAAGATCTTCACCTTTTGACAAACTTCTAATGGTGCAATGCTTAAAGCAAAAAGGACATGTAGTTGCCGTTACCGGAGATGGAACAAACGATGCACCTGCATTGAAAGAAGCTGATATTGGACTTTCAATGGGAATTCAAGGTACTGAAGTTGCAAAAGAGAGTTCAGATATTGTTATATTAGATGACAATTTTGCATCTATAGTAACAGTTTTAAATTGGGGAAGATGTGTTTACAACAACATTCAAAAATTCATTCAATTTCAACTAACAGTGAATGTAGCTGCACTTGTTATCAATTTTGTCGCGGCGGTTTCAGCAGGTGAAGTACCTTTAACAGCAGTTCAATTATTATGGGTGAATTTGATTATGGATACATTAGGTGCATTGGCTCTTGCAACTGAAAAACCTACTAAGGAATTAATGGATCAAAAACCTGTTGGTAGAACAAAACCTCTTATTACTAACATTATGTGGAGGAATCTTTTGTCACAAGCTTTCTACCAAATAGTAATTTTGTTGACACTTCAATTCAAAGGTGAAACTATTTTTGGTGTGACATCAAAGGTAAATGACACATTGATATTCAATACATTTGTTCTTTGTCAAGTGTTTAATGAGTTTAATGCAAGGAAGTTGGAGAAGAAGAATGTGTTTGAAGGGATATTTAAGAGTAAGTTGTTTTTGGGAATTGTTGGTGTGACATTGGTCCTTCAAGTTGTGATGGTTGAGTTTTTGAAGAAGTTTGCTGATACAGAGAGGTTGAATTGGAGAGAATGGATTATTTGTATTGGTTTTGGTGCTGTTTCTTGGCCAATTGGTTTTGTTGTGAAGATGATTCCTGTCTCAGATAAACCGTTACTTGATTTTTTGAGTATGAAGAAGACTTAG 3021 0.3664 MSMTFLTNMNNIETLLNAPNKNSTYNKRWHNAFMKSNKPKIAPTPSFTLVDLNLSPHHSYTIDQETLIDIVKEKNIETLQNHGGVEVVASNLKTNIEFGIKSDDFEDIASRKQVFGSNTYKKPPSKSFFHFIAEAFKDVTILILLVCATLSLAFGIKQHGIKEGWYDGGSIFLAVFIVISMSSISNFKQNKQFDKLSQVSNDIQIDLVRSGRRQKVSIFDIVVGDVVCLKIGDQVPADGLFIDGHSLRVDESSMTGESDHVEINKDHHPFLFSGTKVADGYAKMLVTSVGMNTTWGQMMSSISNDIDEETPLQTRLNKLTSSIGKVGLVVAFLVLIVLLIRYFTGNTKTDNGVKKFNGRKTSFDDVMNAIIGIIADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPLEDNAYSNVDPFVLQLIKEGVAHNTTGGVHKSKSGSDSKFEFSGSPTEKAILSWAVLELNMVMENLSKSCSIIQVETFNSKKKRSGVLLRRNVDNKVSAHWKGAAEMVLRMCSRYYDSYGNVKDLDNETMSKFENIIQGMAASSLRCIALAYTEVANEELGGEGGNKMVVKDDGLTLLGLVGIKDPCRPGVKTAVEACQHAGVNVKMITGDNVFTAKAIAFECGILRPNQDTDETVVEGEQFRNFSPEERLAKVDKISVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASIVTVLNWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTKELMDQKPVGRTKPLITNIMWRNLLSQAFYQIVILLTLQFKGETIFGVTSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFEGIFKSKLFLGIVGVTLVLQVVMVEFLKKFADTERLNWREWIICIGFGAVSWPIGFVVKMIPVSDKPLLDFLSMKKT* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0195 1006 SUPERFAMILY Calcium ATPase, transduction domain A 205 301 IPR008250 -
Tpr2g0195 1006 PRINTS H+-transporting ATPase (proton pump) signature 583 601 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr2g0195 1006 PRINTS H+-transporting ATPase (proton pump) signature 735 751 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr2g0195 1006 PRINTS H+-transporting ATPase (proton pump) signature 767 792 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr2g0195 1006 Pfam Cation transporter/ATPase, N-terminus 82 151 IPR004014 -
Tpr2g0195 1006 PRINTS P-type cation-transporting ATPase superfamily signature 250 264 - -
Tpr2g0195 1006 PRINTS P-type cation-transporting ATPase superfamily signature 427 441 - -
Tpr2g0195 1006 PRINTS P-type cation-transporting ATPase superfamily signature 629 640 - -
Tpr2g0195 1006 PRINTS P-type cation-transporting ATPase superfamily signature 651 661 - -
Tpr2g0195 1006 PRINTS P-type cation-transporting ATPase superfamily signature 735 754 - -
Tpr2g0195 1006 PRINTS P-type cation-transporting ATPase superfamily signature 759 771 - -
Tpr2g0195 1006 CDD P-type_ATPase_Ca_PMCA-like 108 868 - -
Tpr2g0195 1006 Gene3D - 134 988 - -
Tpr2g0195 1006 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 706 816 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr2g0195 1006 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 370 448 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr2g0195 1006 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 73 992 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Tpr2g0195 1006 SFLD C1.7: P-type atpase like 409 788 - -
Tpr2g0195 1006 Pfam Cation transporting ATPase, C-terminus 820 990 IPR006068 -
Tpr2g0195 1006 Pfam haloacid dehalogenase-like hydrolase 424 749 - -
Tpr2g0195 1006 ProSitePatterns E1-E2 ATPases phosphorylation site. 429 435 IPR018303 -
Tpr2g0195 1006 SMART Cation_ATPase_N_a_2 81 156 IPR004014 -
Tpr2g0195 1006 Gene3D - 437 636 IPR023299 GO:0000166
Tpr2g0195 1006 Gene3D - 424 780 IPR023214 -
Tpr2g0195 1006 Pfam E1-E2 ATPase 204 405 - -
Tpr2g0195 1006 SUPERFAMILY Calcium ATPase, transmembrane domain M 83 992 IPR023298 -
Tpr2g0195 1006 PANTHER CALCIUM-TRANSPORTING ATPASE 35 979 - -
Tpr2g0195 1006 SUPERFAMILY HAD-like 425 840 IPR036412 -
Tpr2g0195 1006 Gene3D - 107 303 - -
Tpr2g0195 1006 SFLD p-type atpase 409 788 IPR044492 -
Tpr2g0195 1006 PANTHER CATION TRANSPORTING ATPASE 35 979 - -
Tpr2g0195 1006 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 434 633 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0195 Tpr-Chr2 2525067 2529175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0195 62 1001 Primary Pumps ATPases AT3G63380 68.119 0.0 1268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0195 K01537 - gmx:100793918 1591.63