Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0193 ATGGAGAAGCTAAGAGTAGAAGCTTTTCTATGTTTTGTGACATTGTTCTTATTTTTGAGTTCTACAAATGCTTTGCTTTCTCCTAAGGGAATAAACTTTGAAGTGCAAGCTTTAATGAACATAAAAGGTTCTTTAGTTGATCCTCATGGAATTCTAGAAAATTGGGATGGTGATGCTGTTGATCCATGTAGTTGGAATATGGTCACTTGTTCCCCTGAGAATTTTGTTGTTAGCTTGGGCATTCCTAGTCAGAATTTGTCTGGTACATTATCTCCAAGCATAGGAAACTTAACCAATCTTCAAACTGTAGTGTTACAGAATAACAACATAACTGGACCAATTCCTTTGGAGCTAGGAAAACTTTCAATGCTTCAAACACTTGATCTTTCTGATAACTTCTTCAATGGAAAAATTCCTCCTTCTCTTGGTTATCTGAGAAACCTTCAGTACTTGAGGCTTAATAATAACAGCTTTTCTGGTGAATGTCCTGAGTCACTTGCTAACATGGCACAACTTACCTTCCTTGACTTATCATTCAACAATCTTAGTGGCTCTGTGCCTAGAATTTTGGCCAAATCATTCAGTATTGTTGGAAACCCTCTGGTGTGTGCCATAGGAAAAGAAACAAATTGCCATGGGATGAAACTCATGCCTATGTCAATGAACTTAAACAATACTAACTATGCATTACCATCAAGGAGGAAAAAAGCTCACAAAATGGCCATTGTCTTTGGTTTGAGTCTTGGATGCCTTTGCTTGTTAGTCCTTGGCTTCGGATTGGTACTATGGAGAAGACACAAGCATAATCGACAAGCATTCTTTGATGTTAAAGACCGACATAACGAAGAAGTCTACCTAGGAAACTTGAAGAGCTTCCAGTTAAGAGAACTTCAAATTGCTACTCACAACTTCAGCAACAAAAACATATTGGGAAAAGGTGGTTTCGGTGATGTTTACAAAGGAATTCTTTCGGATGGAACACTTGTGGCTGTAAAGAGACTTAAAGATGGCAATGTCAGTGGAGGAGAGATACAATTTCAGACTGAAGTTGAAATGATCAGCTTGGCAGTGCACAGAAACCTTCTTAAATTGTATGGATTTTGTATGACAACATCAGAAAGGCTTTTAGTATACCCTTACATGTCCAATGGAAGTGTCGCTTCACGTCTCAAGGCTAAGCCGGTGTTGGATTGGGGCACAAGGAAGCAAATTGCATTAGGAGCAGGAAGAGGACTATTATACCTTCATGAACAGTGTGATCCAAAGATAATCCATAGAGATGTGAAAGCTGCAAATATATTACTTGATGATTATTGTGAAGCAGTAGTTGGAGATTTTGGTTTGGCAAAGCTTTTAGACCACAAAGATTCACATGTAACAACTGCAGTTAGGGGCACAGTAGGACATATAGCACCTGAGTATCTTTCCACAGGACAATCTTCTGAAAAGACTGATGTTTTTGGATTTGGCATTTTGCTTCTTGAGTTGATTACAGGTTTGAGGGCACTAGAATTTGGCAAGGCAGCTAACCAAAAAGGAGCCATGCTTGATTGGGTAAAGAAAATTCATCAAGAGAAGAAGCTAGATTTACTTGTAGACAAGGATCTCAAGAACAACTATGACAAGATTGAGCTTGAAGAAATAGTTCAAGTTGCACTTTTATGTACACAATACCTTCCAGGCCACAGACCGAAAATGTCCGAAGTCGTACGCATGCTCGAAGGTGACGGTCTAGCTGAGAAATGGGAAGCTTCTCAACGAGTCGACAACTCTACCAAGTGCAAACCACATGAATTATCTTCGTCTGATCGGTATTCCGATCTTACCGATGATTCTTCTTTGTTAATCCAAGCCATGGAGCTTTCAGGTCCAAGGTGA 1878 0.394 MEKLRVEAFLCFVTLFLFLSSTNALLSPKGINFEVQALMNIKGSLVDPHGILENWDGDAVDPCSWNMVTCSPENFVVSLGIPSQNLSGTLSPSIGNLTNLQTVVLQNNNITGPIPLELGKLSMLQTLDLSDNFFNGKIPPSLGYLRNLQYLRLNNNSFSGECPESLANMAQLTFLDLSFNNLSGSVPRILAKSFSIVGNPLVCAIGKETNCHGMKLMPMSMNLNNTNYALPSRRKKAHKMAIVFGLSLGCLCLLVLGFGLVLWRRHKHNRQAFFDVKDRHNEEVYLGNLKSFQLRELQIATHNFSNKNILGKGGFGDVYKGILSDGTLVAVKRLKDGNVSGGEIQFQTEVEMISLAVHRNLLKLYGFCMTTSERLLVYPYMSNGSVASRLKAKPVLDWGTRKQIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHKDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGLRALEFGKAANQKGAMLDWVKKIHQEKKLDLLVDKDLKNNYDKIELEEIVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAEKWEASQRVDNSTKCKPHELSSSDRYSDLTDDSSLLIQAMELSGPR* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0193 625 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Tpr2g0193 625 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Tpr2g0193 625 SUPERFAMILY Protein kinase-like (PK-like) 282 574 IPR011009 -
Tpr2g0193 625 MobiDBLite consensus disorder prediction 584 605 - -
Tpr2g0193 625 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Tpr2g0193 625 SMART serkin_6 304 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0193 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Tpr2g0193 625 SUPERFAMILY L domain-like 34 205 - -
Tpr2g0193 625 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Tpr2g0193 625 Pfam Leucine rich repeat 124 182 IPR001611 GO:0005515
Tpr2g0193 625 ProSiteProfiles Protein kinase domain profile. 304 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0193 625 Gene3D Transferase(Phosphotransferase) domain 1 381 593 - -
Tpr2g0193 625 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 625 - -
Tpr2g0193 625 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 4 625 - -
Tpr2g0193 625 Pfam Protein kinase domain 305 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0193 625 MobiDBLite consensus disorder prediction 584 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0193 Tpr-Chr2 2515710 2520995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0193 1 625 Receptor kinase-like Gene Family AT5G16000 75.316 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Tpr2g0193 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0193 - - gmx:100806650 1068.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0193 2 2515710 2520995 Tpr2g0193 2 2515710 2520995 ECH
Tpr2g0193 2 2515710 2520995 Tpr6g2973 6 32246559 32251279 PCT