Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0145 ATGTTCCCTTACAGTTCAAACCCTTACCCTTCTTTTCTTCCCTCATCTTCATCTTCTTCACTCTTTCCTTTTCCATTCCTCAATCCTGAAAATGCTTCCTCAAACACCAACAATAACAACAATACCCTTTTTCTTGATCCATTTTCCATTCCTTACATACCAACTCATCATTCTCATCCTCATCCTCATCATCCCAACATTACAAATATTCCAGAAACCCTAAACAACTTGGCTGTTTCACAAGAAAATAATAATAGTAACATTGCAGTTTCAATGCCTAAACAAGATCCTTCAACTCTTGGTGGTTCCAATTCTCACTATGGTATTTCTTGTTTCCTTACCAAGAAACCGGTTAAGAAAGACCGGCATAGTAAGATTTATACTTCTCAAGGTTTGAGAGATCGAAGGGTTAGGCTTTCAATTGAGATCGCTCGAAAATTCTTCGATCTTCAAGATATGCTAGGGTTTGACAAAGCTAGCAACACACTTGATTGGCTTTTCACAAAATCTAAGAAAGCAATTAAGGATCTAACTAAGAGTAAGCAAAAAAACAAAAATAGTGAAGGTGGTGATGCTACTAAAAGCTTCTCATCTTCTTCGGATTGTGAAGATTCGGAAGTTGCTATTAATGATTCTTCAAACCTACAAATGGAGGGTGTAGGAAGTAAATTTGAAGAAAGGAAGTTGAAAAGGGTTCAAATGAAAGAACCAGCTTGTGTTAGAGCTAATAAGATGAAGGAGTCAAGGGAAAAAGCAAGAGCAAGAGCAAGGGAAAGAACTAGTAACAAGATCTCCAACAACATAAGGGGGGTGCAAGAAGTAGAATTAAAGAAAAAATATGAAAATAATCTTCAAGCTTTTCAACAATCAAGATCTTCACAAGATCATCAACTTGTGAGTAGTAATGAAGGACCAAGAAATGATTTCAATGTTATTGAGGAATCAATTGTGATTAAGAGAAAGCTGAAACCTTCAATAATGGTTTCTCATCATAATCATAATCATAATCATCATCATCATAACCATCAAAATCATGTTATCCCTAAGGAAGCTACAAGTTTCAACAATAATGGTGATTACCATTTCTTGCCTAATTCATCTCCAAATTGGGATGCTAATAATGGTACTTCTTCCACTAACCGCTCCACCTTTTGTGCAATAGCTAGCATGAATCTTTCTACAGGGCTTCAAATCTTTGGAAAATCATGGGAGGAATGCACCAATCCACGTCTACATTAG 1239 0.3616 MFPYSSNPYPSFLPSSSSSSLFPFPFLNPENASSNTNNNNNTLFLDPFSIPYIPTHHSHPHPHHPNITNIPETLNNLAVSQENNNSNIAVSMPKQDPSTLGGSNSHYGISCFLTKKPVKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKDLTKSKQKNKNSEGGDATKSFSSSSDCEDSEVAINDSSNLQMEGVGSKFEERKLKRVQMKEPACVRANKMKESREKARARARERTSNKISNNIRGVQEVELKKKYENNLQAFQQSRSSQDHQLVSSNEGPRNDFNVIEESIVIKRKLKPSIMVSHHNHNHNHHHHNHQNHVIPKEATSFNNNGDYHFLPNSSPNWDANNGTSSTNRSTFCAIASMNLSTGLQIFGKSWEECTNPRLH* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0145 412 Pfam TCP family transcription factor 118 265 IPR017887 -
Tpr2g0145 412 MobiDBLite consensus disorder prediction 177 199 - -
Tpr2g0145 412 ProSiteProfiles R domain profile. 246 263 IPR017888 -
Tpr2g0145 412 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 4 411 - -
Tpr2g0145 412 ProSiteProfiles TCP domain profile. 119 177 IPR017887 -
Tpr2g0145 412 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 411 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0145 Tpr-Chr2 2039110 2042673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0145 115 265 TCP Transcription Factor Family AT1G67260 45.860 5.44e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr2g0145 TCP 9.2e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0145 - - cam:101499957 498.049