Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0144 ATGGATCCTCCTCGTCGAGCACCACGAACAGTAATCGACCCCGTTCCTAAATTCCGTCAAGTCGGATTCTTCGCTCCACCCGACCGTTCACAATCGGGCCCCATCGCCGCCGATACATCCGCTTCTCTTTCCCCCGTTATGATTCCTCCGCCACGTCATCTTTCCGATAACCTAATTCTCCATGCTCGTCCGTCGAATTCTCCTCGCCGTGGGCCGGAGTCGATTACTGTTGGTGGAAGTAATTCTGATGCTCCTGTTTCGCCGGCGCCGTCATCTTCTTATTCGAGTAGGTTTGTTGTTGGTGGTGATAGAGGGTTTTTTGATGGGAAGGGGAAGGATAATGGGAAAGTTGTGGCTTCTTCGTTTCCGAGAGGTGGATTTGATTTGACTGCGTTGAAGGGGAATGCTGCTGCTTCTGGTTCTTCTATTGTTGTTCCGGCGAGTCAGTTGACTACTGTTTCTGTTGTGAATGATTCTCTTGGGATTCCTGAAAAGGAAAAAACAAACAAAGGAGGAGGGTCAGCTGGGGAAATGAAAGACCAATCTAGTTCAAAACAGCAGAAACCAAAACCCACAAAAGCTGAAAGACGTGCACTTCAAGAAGCTCAACGAGCTGCAAAGGCTGCTGCAAAAGGCGAAGGAAATAAGGCGTCTGGAACTGCTACATCAGCGAATGCAAAACCAGCTAAAGCAGTAAAGCCTGCACAGAAAGCTGATACTGCATCAGTTGCAGCCACCGAGAAGAAGGGGGGTGATTTTCCACCTGAAAAGGATAGAAAGAAAGATGCCCCTCAACCACGCCTGCAGTATGATGACAAGAGCCGGGTGGAGAAAGCTAAACGTCGTTCTGTGGTGAAACAAACTGAGTCGAGGAACAGAGTTGAGTTGTTCAGGCATTTACCACAATATGAGCATGGGAGTCAGCTTCCAGATCTTGAGGCAAAGTTTTTCGATCTTTATCCTGTGCATCCTGCTGTTTATAAGGTGGGTTTGCAGTACATATCTGGAGATATATCTGGTGGCAATGATCGTTGTATTGCAATGCTTCAAGCATTTCAGGAGGCAATCAAAGACTACAAGGTTCCACCTGAGAAGAGTCTCGGGAGAGACTTGACAGCAAAAATTGGTAGTTATGTATCATTTCTTAATGAGTGTCGACCTCTGTCAATCAGCATGGGAAATGCAATTAGATTTTTCAAGAGTCAGATAGCCAAGCTACCTTTAACCTTGTCTGAGTCAGAAGCAAAAATTTCTCTCGACTCAGATATTGAACGTTTTATAAGTGAGAAGATCATACTTGCCAACAAGGTGATAGTCAAGCACGCTGTCACCAAAATAAGAGATGGGGATGTTCTTCTAACTTATGGCTCATCATTGGCAGTTGAAATGATTTTTTTACATGCACACGAATTAGGAAAACAGTTTCGTGTTGTGATAGTTGATTCTCGTCCAAAGCTTAGAGGCCAACAGTTGCTCCGCAGGCTTGTGGAGAAAGGTCTTAACTGTACATACACTCATATAAATGCTGTTTCCTACGTAATGCATGAAGTTAGTCGAGTCTTTCTGGGTGCTGAATCAATACTGTCTAACGGAACGGTATATTCAAGAGTGGGGACTGCAAGTGTTGCAATGGTTGCTCATGCATCCCGTGTACCAGTGATAGTATGTTGTGAGGCCTATAAATTTCATGAAAGGGTACAGCTAGATTCAATTTGCTCGAATGAGCTTGGTGATCCAGATGTCATTTCAAATGTTAAGGGTAGAGTGGATGTCAACCACTTGGATGGTTGGGCCGATATTGAAAATCTGCAACTTCTAAATCTGATATATGATGCAATGCCTTCAGATTACGTCTCAATGATAGTCACAGATTATGGCATGGTCCCCCCCACAAGTGTGCCTGTAATTGTAAGAGAATATGGGAGAGAATAG 1932 0.4477 MDPPRRAPRTVIDPVPKFRQVGFFAPPDRSQSGPIAADTSASLSPVMIPPPRHLSDNLILHARPSNSPRRGPESITVGGSNSDAPVSPAPSSSYSSRFVVGGDRGFFDGKGKDNGKVVASSFPRGGFDLTALKGNAAASGSSIVVPASQLTTVSVVNDSLGIPEKEKTNKGGGSAGEMKDQSSSKQQKPKPTKAERRALQEAQRAAKAAAKGEGNKASGTATSANAKPAKAVKPAQKADTASVAATEKKGGDFPPEKDRKKDAPQPRLQYDDKSRVEKAKRRSVVKQTESRNRVELFRHLPQYEHGSQLPDLEAKFFDLYPVHPAVYKVGLQYISGDISGGNDRCIAMLQAFQEAIKDYKVPPEKSLGRDLTAKIGSYVSFLNECRPLSISMGNAIRFFKSQIAKLPLTLSESEAKISLDSDIERFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSLAVEMIFLHAHELGKQFRVVIVDSRPKLRGQQLLRRLVEKGLNCTYTHINAVSYVMHEVSRVFLGAESILSNGTVYSRVGTASVAMVAHASRVPVIVCCEAYKFHERVQLDSICSNELGDPDVISNVKGRVDVNHLDGWADIENLQLLNLIYDAMPSDYVSMIVTDYGMVPPTSVPVIVREYGRE* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0144 643 SUPERFAMILY NagB/RpiA/CoA transferase-like 320 640 IPR037171 -
Tpr2g0144 643 MobiDBLite consensus disorder prediction 155 287 - -
Tpr2g0144 643 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 643 - -
Tpr2g0144 643 Gene3D - 433 640 IPR042529 -
Tpr2g0144 643 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 1 643 - -
Tpr2g0144 643 MobiDBLite consensus disorder prediction 250 287 - -
Tpr2g0144 643 MobiDBLite consensus disorder prediction 69 95 - -
Tpr2g0144 643 Pfam Initiation factor 2 subunit family 338 630 IPR000649 GO:0044237
Tpr2g0144 643 MobiDBLite consensus disorder prediction 183 202 - -
Tpr2g0144 643 MobiDBLite consensus disorder prediction 54 95 - -
Tpr2g0144 643 MobiDBLite consensus disorder prediction 24 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0144 Tpr-Chr2 2025979 2033841 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0144 5 643 Eukaryotic Initiation Factors Gene Family AT5G38640 62.836 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0144 K03680 - gmx:100775998 953.74