Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0134 ATGGAACTCGATTCATCTTCACTACAACTCAATCAGAGCAAGGTTGATTCCAATGGAAACCAAGTGAGTCGTAACAATGCACGCGGAATTCGTGTTATTGGAAACAGAATCTATGATTCTCAAAATGGCAAAACTTGTCACCAGTGCCGGCAAAAAACAAGGGATTTTTCTGCAGGATGTAAGAATCCAAGAGATGGGAAGCCTTGTCTCATTAGGTTCTGCCACAAATGCCTCTTGAATAGATATGGGGAAAAGGCGGAGGAGGTAGATCTATTGAATGATTGGAATTGTCCAAAGTGCAAAGGCATTTGCAACTGTAGTATATGCATGAAAAAAAGGGGTCAACAACCTACTGGTTTACTAGTTCGTTGTGCCAAGGCATCCGGTTATAACTCTGTGTCAGAAATGCTTAGCAAGAAGGCTTCTGAAGATTTGCAATCGAACAATGCTGCAGTTTTGCCTATTAAGGAAGCTACTTCGGAAATGGAGCTTGTAGTGGATCTATCAGGGGAACCAGGGAAGGAAAACTCATTAGGTGGAAAAAAAGGTTTAAAAGTTGAAAATGAGAAAACCAAGAAAATGAAGCGGGAAAAGCTAAAGGACATGTCTAATTATAACAGTGTTGATGATGCTTGTCAAAACAAGAAATTGAAAATGTCTAAACTTTGTAATGGAGCTTCAGACGGTGAAGTGAAAAGAAATGCAAAGGCTGAAATGGAAACAAAAGTAGAGGAGAATCATGGCATGATTCGTGGTCAAATGGATGGTCCTGTTGCGATGGATGATGGTGACAATGCTACTGCCAAGTCTCAGACAAATGGTATAATTTTGCATGCTCAAAAAATTAAGGAAGAGACTCCTTTGCCTCCTGGCATTGAGATGACAAAAATATTAGATATTGAGTTTGCACCAGAAGATGTTGGGAATGCGTTGCAGTTTTTAGAATTCTGCAGAGTGTTTGGAAAGGCTCTTGATATCAAGAAAGGAGAAGCTGGAGCTATTTTAAGAGCATTGATACGTAAGCAAAATTTACGACGCGGACAAAATACTTTAGTGGTTGAGTTCCAAATCAAGTTGTTGACTTTGATACTATCTGAATCAGAAACTGAGTCTTCATCCTTAGCTGAGGGCAATGGAAAAAATTCATGGTTGAAAGTTTTGGAGGATTTAATTACTGAATCTGATCTTGAACTAAAAGAGTTTGCATTGGATTGGCTTAATAGAGGCATTAGTGGATATAATGAGTTGGACATATCTAAAAAGCTTATCCTTCTGAATTTTATCTGTGAGGAAGCTCTCTGCACAATGAAGCTAAGGAGTTATATTGATGACCAAAATGCAAAAATTGCTGAAGAAATGAAAGCAGCAAAATCTAAGGTTGCTGAAGCTAAGGAAAAGGAAAGAAGTCTTAAGCTACAGCTGCAAGATGAGATGGCAAAAGCTGTTATATCGAATGGGAATAATCTCTCAATCTCAGAATACGATGCTCTTGTTTCAAAAATTAAAAGTGAAGCAGCTAAAGCTCATACCGAGTTGCTTGAGGCAAAGGGCATAATTCCTAAAGGGAACCAATGTTGTGATGCAGTGAGAATTGAGCCTGAATACTTGGATAACAGTGGTAAGACGTTCTGGAAATTAAGATGCTGTAATGATGAATATGCTTTCTTGTTACAAGATATGAAGATCCATGAAGATGCTGTTAAAGTCAATGAAAAATGGTTTGTTTATGCAGCTGAGCAGAAAGATGAGGTCAATAAGTACATTTCCTCTAGGAGAGATTGCTTACCAAAGCTTACTTCAGTGTAA 1806 0.3837 MELDSSSLQLNQSKVDSNGNQVSRNNARGIRVIGNRIYDSQNGKTCHQCRQKTRDFSAGCKNPRDGKPCLIRFCHKCLLNRYGEKAEEVDLLNDWNCPKCKGICNCSICMKKRGQQPTGLLVRCAKASGYNSVSEMLSKKASEDLQSNNAAVLPIKEATSEMELVVDLSGEPGKENSLGGKKGLKVENEKTKKMKREKLKDMSNYNSVDDACQNKKLKMSKLCNGASDGEVKRNAKAEMETKVEENHGMIRGQMDGPVAMDDGDNATAKSQTNGIILHAQKIKEETPLPPGIEMTKILDIEFAPEDVGNALQFLEFCRVFGKALDIKKGEAGAILRALIRKQNLRRGQNTLVVEFQIKLLTLILSESETESSSLAEGNGKNSWLKVLEDLITESDLELKEFALDWLNRGISGYNELDISKKLILLNFICEEALCTMKLRSYIDDQNAKIAEEMKAAKSKVAEAKEKERSLKLQLQDEMAKAVISNGNNLSISEYDALVSKIKSEAAKAHTELLEAKGIIPKGNQCCDAVRIEPEYLDNSGKTFWKLRCCNDEYAFLLQDMKIHEDAVKVNEKWFVYAAEQKDEVNKYISSRRDCLPKLTSV* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0134 601 ProSiteProfiles DDT domain profile. 304 369 IPR018501 -
Tpr2g0134 601 PANTHER OS05G0300700 PROTEIN 16 591 IPR040221 GO:0006355
Tpr2g0134 601 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 38 137 IPR018866 -
Tpr2g0134 601 MobiDBLite consensus disorder prediction 1 22 - -
Tpr2g0134 601 SMART testlast3 304 369 IPR018501 -
Tpr2g0134 601 Coils Coil 446 480 - -
Tpr2g0134 601 PANTHER OS05G0300700 PROTEIN 16 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0134 Tpr-Chr2 1897490 1901732 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Tpr2g0134 zf-4CXXC_R1 2.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0134 - - mtr:MTR_6g017265 889.412