Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0113 ATGAGTGATGTTAGTGTGAAGGGTTCTTCATGTTTAGCAATAACAGAGAAGAATAATAATCAGAAGCAAGATGGTAGTTGTGTTGGCATTTTCTTTCAATTATTTGATTGGAATAAAACACTCACAAAGAAGAGATTTTTCACCAAGAAACTTCTTCCTCCTGTTAATGCAAAACAAGATTCTTTGAAGAGGTTTAAAAGTGATGAGAAAATGCCTAATTCTAAGCTCCATTTGATTGCTAATGGGAACAATGTCGGTTTCACCAACGCGGAAAAAGGTGAAAATTGTGTTATAGAGGTTGAACAACAAAAGCATGAAATGAAAGTACCAAGTCTTGTAGCTAGGTTGATGGGTCTAGAATCAATTCCAGCTTCGAAGAGAGATAAGTCGGAGAAATCTTCCTTTTCTGATAGTGATGATGGGGAGGAGTCTTTCGAAATCGGGGATGCAAATGCAAGGCATGATTCAAGGCCTCAGAAGCTTCGGAAAACAGAGGCAAACGAGAGAAGGGCAGTGACTAGGTTTGGTACAGAGGCATTGCAAATCAAGAGTGTTTTGTCGCAAGTGAGAAAGTATAATCCTCATCATCACCATCATACGAATAAACTTGTTTCACCTTTGAAGAGTCCGAGAATTTCTTCTGGAAAGAGCGGGTCTCGAAGCTCAAGGTTGATAGAAGCAGCTACTAAGATCTTGGAACCTGGCTTGCAGCCTACAAGCAGATCCAAATCTTCTCTTAAATCTTCCATTTCTACGTTTCCTCCCAATAACGGCATTGCCATCGAAAGGGTTGGAGCTCGGCTACAAGATATACACAAACAATCATGTTATCATGCCGGCATAGACAAGTCAATGGTGGAGCATACTTGCAAAACTTGTGGCAATTTGCTTGATGTTGAGATTAGCAGACCTGTTGATTCAGATGTTTTCACTGATTTCTCTTCGGCGTTGACACAAAATGGAAGATTATTCAGTCCTTCTCATGAAAATGATGTAGTTCTTCTGAGAAGTCAAGAGAAGATCATAACTCTTGTTGATGAAGATGTTAAAAAGAATGCTTATTCTTGTAATGAATCCACTACCATAAGAATACCTGTGCCGGAAAAATGGAATTTGTCACGCCAATTGCACGGAGGCTTAGAGGACGATGGCACATCTTCTTTCGCCTTCAGACACAAAACTCAAACGCAGGAACGAGTATTAAGCGGTGATAAGATGTTATTTGAATTTGGATCTAGAACAAGTAATATGCAAGAGAAGAGAGTTTCAACTGCTGCAACTGCAAGCACTGCGAATGGAAATAAAGATTCTGTTGGTTTGAATCGAAGTCTAAGTGGTCGGAATCGGACAAGGTCTCCTACCAAGTTGGGTAGCTGTGATCATGAGAGGAAAAGAAGGACATTGAATGTCTCAAAAGTTGATAATACAGCTTCTGTCAATTCGGTTACATCGAAACAAAGAAATGTTAGTTTTGATGCACAGAGGGGGAAAAGGAGAAGTTTTGATGCTTTCTCTCCAAACAATTCTAATGACAAAAGTAAACGAGAGAGTTATCAAAAAACTGATAAGATCAATAGGGTAGTTTCATCTACCTTAAGTTTACCTCTTAAAAAAAAGGAAGAAACAAGAAGTGATTATCAGATTAAGACTTGTTTCCAAAGACATCATCCACCCTTGAGAGAAGATGTTATAGGTGCTTTTCTAGAACAGAAGTTGAAAGAATTAAGGTCTAGAGAAAATAAGGAGTTGGTTAATGGTGATCGACCTAAAAGATCTTCTGCTTTGATTCTTCAAGAATTGATATCTGTTCTGAATGTGGAGCGTCTAATATGCACCGATGATCATCGTATGTTCAATGACAAAGATCACATGTATGAAACAAAACATGTTCGATTATTTGGAACGTCTTGCAATGGTAATCATCTCAGTCCTGGATCAGTCCTAGAAGCATCCTTTTCTTCCAGTAGTCTCGAAGAAAACTCAGGGCATTGTTTTCATCCCGACTCTATAAATTGTTCGTATGATCAACCAGAACGGTTGGAACAGGAAGCCGGACTTTTAAATTCTGAAACATCATTTAACATTGGGAAGATAGGTTATAAGATACTGACCGAACTCGTTAACCGAATTCATAGTATTTTGCATAGTTTAGATTCTTTTTGGACAAGATTAACAAAAAGCAAGCTCAATCATATGAAAGACGTTATCTTCAATGCTGAATTGATTCTTGGAAATGTGACTCGGCACAGTGAGGTTGAAGTGCTGCCACAGCTTCTCATTTCTTGCATTCTTGATGAACTAGACAACATTGCAACCAATACTATGCTGAGAAATTTCAACCAAAGCGAAATAAAGGGATTTCTATTTGATTGTGTAATCGAGTATCTAGAATCAAATTGCTTCCAACATTATTATAGCGTGTTTAAGTCATGGTGTGCATGGACGAAGGTTCCTTTATGCATAAAATCCGAGGTTGTGGTTCAAGGGGTTAAGAGTGAGATTAAGAAGTGGGAATTTTTAGCAGGAATGGAACCAGATCAAATAATAGAATGGGAGATGAGTCACTCATTGGGGAAATGGACAGGTTTTAACATTGAAGCTTTTGAGTTTGGTGTTGATATTGGTGAGGATGTGCTTCAAATTTTGCTTGATGAAATTGTTGAAGACCATGTAAATTTCAGGAAAGTTACTGTTTGA 2697 0.3823 MSDVSVKGSSCLAITEKNNNQKQDGSCVGIFFQLFDWNKTLTKKRFFTKKLLPPVNAKQDSLKRFKSDEKMPNSKLHLIANGNNVGFTNAEKGENCVIEVEQQKHEMKVPSLVARLMGLESIPASKRDKSEKSSFSDSDDGEESFEIGDANARHDSRPQKLRKTEANERRAVTRFGTEALQIKSVLSQVRKYNPHHHHHTNKLVSPLKSPRISSGKSGSRSSRLIEAATKILEPGLQPTSRSKSSLKSSISTFPPNNGIAIERVGARLQDIHKQSCYHAGIDKSMVEHTCKTCGNLLDVEISRPVDSDVFTDFSSALTQNGRLFSPSHENDVVLLRSQEKIITLVDEDVKKNAYSCNESTTIRIPVPEKWNLSRQLHGGLEDDGTSSFAFRHKTQTQERVLSGDKMLFEFGSRTSNMQEKRVSTAATASTANGNKDSVGLNRSLSGRNRTRSPTKLGSCDHERKRRTLNVSKVDNTASVNSVTSKQRNVSFDAQRGKRRSFDAFSPNNSNDKSKRESYQKTDKINRVVSSTLSLPLKKKEETRSDYQIKTCFQRHHPPLREDVIGAFLEQKLKELRSRENKELVNGDRPKRSSALILQELISVLNVERLICTDDHRMFNDKDHMYETKHVRLFGTSCNGNHLSPGSVLEASFSSSSLEENSGHCFHPDSINCSYDQPERLEQEAGLLNSETSFNIGKIGYKILTELVNRIHSILHSLDSFWTRLTKSKLNHMKDVIFNAELILGNVTRHSEVEVLPQLLISCILDELDNIATNTMLRNFNQSEIKGFLFDCVIEYLESNCFQHYYSVFKSWCAWTKVPLCIKSEVVVQGVKSEIKKWEFLAGMEPDQIIEWEMSHSLGKWTGFNIEAFEFGVDIGEDVLQILLDEIVEDHVNFRKVTV* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0113 898 MobiDBLite consensus disorder prediction 416 453 - -
Tpr2g0113 898 MobiDBLite consensus disorder prediction 235 250 - -
Tpr2g0113 898 MobiDBLite consensus disorder prediction 416 460 - -
Tpr2g0113 898 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 11 892 - -
Tpr2g0113 898 Pfam Domain of unknown function (DUF4378) 785 885 IPR025486 -
Tpr2g0113 898 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 11 892 - -
Tpr2g0113 898 MobiDBLite consensus disorder prediction 146 169 - -
Tpr2g0113 898 MobiDBLite consensus disorder prediction 193 250 - -
Tpr2g0113 898 MobiDBLite consensus disorder prediction 206 224 - -
Tpr2g0113 898 Pfam DUF761-associated sequence motif 101 128 IPR032795 -
Tpr2g0113 898 MobiDBLite consensus disorder prediction 124 139 - -
Tpr2g0113 898 MobiDBLite consensus disorder prediction 480 521 - -
Tpr2g0113 898 MobiDBLite consensus disorder prediction 124 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0113 Tpr-Chr2 1563351 1567832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0113 9 889 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.228 4.64e-82 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0113 - - cam:101506047 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0113 2 1563351 1567832 Tpr2g0113 2 1563351 1567832 ECH