Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0098 ATGAAGAATTCTGGAAAAGAGATTGGATTACCATTGAATCTTGACATTAAGAAGAAACTTTCTCTTCAATCTAATGCCTCCAAAGGTCCACCATCCCCCAAGCTACCTTTTTTCATTGGTGTTGCTGGTGGAACTGCATCTGGAAAAACAACTGTGTGCAACCTAATAAATACTCAGCTTCATGATCAACGTATTGTCCTCATTAATCAAGACTCATTTTACCACTCATTGAGTGACAAGATCTTACAAAAAGTTAATGACTACAATTTTGATCATCCTGAGGCATTTGATACGGAGCTTATGCTTTCTACTATGGAGAAATTAAAACATGGACAAGTTGTTAACATACCAAATTATGATATCAATAGTCGTAAGAGAGTTGAACCACCACGTCAGGTTCACCCTGCAGATATCATAGTTTTAGAAGGGATACTTGTTCTTCATGATTCTCGTGTTCGTGATCTTTTGAACATGAAGATCTTTGTTGACGAAGATTCTGATATACGCCTTGCACGAAGGATTCAACGTCACACTATTGAACGTGGAAGGAACATTCAAAATGTTCTAGACCAATATTGCAGATTTGTGAAACCTAGTTTTGAAGATTTTGTACTTCCAACAAAAAAATATGCTGATATTATCATCCCTGGTGGAGGAGATAATGATGTTGCCATTGACTTGATCATGCAAAATATTCGTACAAAGCTTGGTCAACATGATTTGTGTAAAATATATCCAAATATTTTTATCATTTTTTCTACATTTCAGATAAAGGGAATGCATACTCTCATACGTGATGTTGGAACTACAAAGCATGATTTTGTTTTTTATTCAGATCGTCTTATTAGACTGGTTGTTGAACATGGACTTGGTCATCTTCCTTTTACAGAAAAGCAAGTCACAACACCAACAGGATCTGTATACTCTGGTGTGGTTTTCTGTAGCAGGCTATGTGGAGTGTCAATTATTAGAAGTGGAGAAAGCATGGAGAATGCATTAAGAGCATGTTGTAAAGGAATCAAAATTGGTAAAATTCTTATTCATGGACATGGCACAAATGGTAGACAGTTAATATATGAGAAACTACCATCAGATATTGCAAGTCGTCATGTGTTGCTACTTGATCCTGTTCTGGCTACAGGAAATTCTGCTATAAAAGCTATCTCACTGCTTTTGAATAAGGGCGTGCCAGAATCCAACATAATCTTTCTAAATTTAATAGCATCACCACAAGGAATAAATGCAGTTTTTGAGAGATTTCCAGCGATAAAACTTGTGACATCGGAGATTGATGCAACACTGAATGAGAATTCTCGTGTGATCCCTGGCTTAGGGGAGTTTGGTGATCGTTATTTTGCCACAGATGATTAG 1371 0.3662 MKNSGKEIGLPLNLDIKKKLSLQSNASKGPPSPKLPFFIGVAGGTASGKTTVCNLINTQLHDQRIVLINQDSFYHSLSDKILQKVNDYNFDHPEAFDTELMLSTMEKLKHGQVVNIPNYDINSRKRVEPPRQVHPADIIVLEGILVLHDSRVRDLLNMKIFVDEDSDIRLARRIQRHTIERGRNIQNVLDQYCRFVKPSFEDFVLPTKKYADIIIPGGGDNDVAIDLIMQNIRTKLGQHDLCKIYPNIFIIFSTFQIKGMHTLIRDVGTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVTTPTGSVYSGVVFCSRLCGVSIIRSGESMENALRACCKGIKIGKILIHGHGTNGRQLIYEKLPSDIASRHVLLLDPVLATGNSAIKAISLLLNKGVPESNIIFLNLIASPQGINAVFERFPAIKLVTSEIDATLNENSRVIPGLGEFGDRYFATDD* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0098 456 Gene3D - 237 454 IPR029057 -
Tpr2g0098 456 SUPERFAMILY PRTase-like 238 454 IPR029057 -
Tpr2g0098 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 228 IPR027417 -
Tpr2g0098 456 Gene3D - 35 236 IPR027417 -
Tpr2g0098 456 PRINTS Uridine kinase signature 36 53 - -
Tpr2g0098 456 PRINTS Uridine kinase signature 66 77 - -
Tpr2g0098 456 PRINTS Uridine kinase signature 111 126 - -
Tpr2g0098 456 PRINTS Uridine kinase signature 167 177 - -
Tpr2g0098 456 PRINTS Uridine kinase signature 181 192 - -
Tpr2g0098 456 PRINTS Uridine kinase signature 203 216 - -
Tpr2g0098 456 CDD UMPK 38 235 IPR000764 -
Tpr2g0098 456 Pfam Phosphoribulokinase / Uridine kinase family 38 224 IPR006083 GO:0005524|GO:0016301
Tpr2g0098 456 PANTHER URIDINE KINASE 17 452 - -
Tpr2g0098 456 TIGRFAM udk: uridine kinase 37 235 IPR000764 -
Tpr2g0098 456 Pfam Uracil phosphoribosyltransferase 253 454 - -
Tpr2g0098 456 PANTHER URIDINE KINASE-LIKE PROTEIN 5 17 452 - -
Tpr2g0098 456 CDD PRTases_typeI 317 427 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0098 Tpr-Chr2 1378614 1384462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0098 36 456 PRT Gene Family AT1G55810 73.934 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0098 K00876 - gmx:100803453 697.197