Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0072 ATGGAGGAGGAAGCATCAAAAAAGAGTGGTGGAAGAGTCTTCAGCGAAAAAGACGATCTTGTTATTCTGAGTGGTCTTGCTGATTTCCTTTCCAAAACTGGAAAGGATCCTTTGAAGCATGCAGCTGATTTTCACTATTTCATGCAGGAGGAAAAATCCTTTCGTTCAGATTTGAGTAACATGCAAATTAAGCGAAAAGTTCGAACTTTAAAAGACAAGTTTGAAAAAAGTCAGATTTTCACTAAACCACATGATAAAAAAGCTTTTAAACTGTTCAATAAGATTATTTGGAGAAATAATGATGAGAATGAAGCTGGAGAAGAAAATCGAATGGATGTGGAAGGTAGTGTTGCTTATATTTTGAATGAAATTTTTAGATTTGACGGTGATATCGCTTTGAGTAAGGATGATGCGAAAAAGGGATTGGAATCGATAGACGAATCATTGAGGGCAGAAATGGAAGAAAAGTGGAGGAAGCTTCGTATGGATGAGATGAACCTTGTTGTGACTCGGGCACAGTACGCTAAGGATCGGGCCAGGTTGGTCTTGTAG 552 0.3822 MEEEASKKSGGRVFSEKDDLVILSGLADFLSKTGKDPLKHAADFHYFMQEEKSFRSDLSNMQIKRKVRTLKDKFEKSQIFTKPHDKKAFKLFNKIIWRNNDENEAGEENRMDVEGSVAYILNEIFRFDGDIALSKDDAKKGLESIDESLRAEMEEKWRKLRMDEMNLVVTRAQYAKDRARLVL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0072 183 Pfam Protein of unknown function, DUF573 12 95 IPR007592 GO:0006355
Tpr2g0072 183 PANTHER BNAANNG10740D PROTEIN-RELATED 4 182 IPR007592 GO:0006355
Tpr2g0072 183 PANTHER STOREKEEPER PROTEIN 4 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0072 Tpr-Chr2 1107821 1108372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0072 2 97 GeBP Transcription Factor Family AT1G61730 38.835 4.82e-13 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tpr2g0072 DUF573 2.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0072 - - mtr:MTR_2g010790 148.673