Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0062 ATGGAGATAGAAATAGATTCAGTTTCTTCACCTTCCAAAGTTAAAGAAATCGACGGCCTCCTAGCGGACGTCGGTTACAAAGTTAAGTCATCTGAGCTGCATCAAGTAGCTCAGAACATCGAACGGTTGGAGAACGTAATCGTGAATTCATCGTCAAGCGACATTTCTCAATTCGCTTCCGATACAATTCACTACGATCCCTCCGACATTGGCAATTGGGTGGACAATCTCCTCTCGGAGTTCGACCACACCAATTCTTTACCTTATGATTTCTCTCAACTGTCGGATCTCGCACAAGATCAACACCACCACCACCACCACCACCACCACCAGAACCACCAATTAAAGGTTGTTACCACCGTTGAAGAAGACTCAGCGATAAAGCTTATTCACATGCTGATGACGTGTGCTGATTCCTTGCAACGTGGCAACATACAATTGGCTGGCTCGTTAATCGAAGGCATGCAAGGTTTGTTAACAAACATGAACACCAACTCCGGCATCGGAAAAGTCGCCGGATACTTCATCGACGCTTTAAACCGTCGAATCTTCGGTCAAAACAATATCATCCATATCGAGAACGATGTTCTTTACCATCACTACTACGAAGCTTGTCCATATCTCAAATTCGCTCACTTCACAGCAAATCAAGCTATACTGGAAGCTTTCAACGGTCACGATTGTGTCCACGTCATTGATTTCAACCTCATGCATGGTCTTCAATGGCCGGCGCTAATTCAAGCTTTAGCGCTTCGTCCTGGTGGACCTCCGTTTCTCCGCCTCACCGGCATTGGTCCGCCGTCGCATGATGACCGTGACAACCTCCGTGAAATTGGACTCCGTCTTGCCGAACTAGCTCGCTCCGTTAACGTTAGATTCGCTTTTCGTGGAGTCGCGGCGTGGCGGCTTGAAGATGTGAAGCCGTGGATGCTTCAGGTGAGTTCTAAAGAAGCTGTGGCGGTTAATTCTATTATGCAGCTTCATCGTCTTCTTGGATCTGAACCCGACCCGAATAATCCATCCGCTATTGAAACGGTTTTGGGCTGGATCCGAAGTTTGAACCCGAAAATCATGACGGTTGTGGAACAAGAAGCGAATCATAACGAGGATGGGTTTATGGACCGGTTCACTGAGGCATTACATTATTACTCGACCGTTTTTGACTCGCTGGAAGCGTGTCCGGTTGAACCGGATAAAGCAATGGCTGAGATTTATTTACAGAGGGAGATTTGCAACGTGGTGTGTTGTGAGGGACCGGCTCGAGTGGAGAGACATGAACCGCTTATTAAGTGGAGGGAACGGCTTGGGAAAACCGGGTTCAGACCGTTACATTTGGGTTCGAATGCTTTTAAACAAGCGAGTATGTTATTGACTCTGTTTTCTGCGGAGGGTTACTGTGTTGAAGAGAATCAAGGGAGCTTGACTTTGGGTTGGCATAGCCGTCCTCTCATTGCGGCTTCGGCTTGGCAAGCTGTGCCTGAAACGCTGCGTTTTGATCATTGA 1503 0.4757 MEIEIDSVSSPSKVKEIDGLLADVGYKVKSSELHQVAQNIERLENVIVNSSSSDISQFASDTIHYDPSDIGNWVDNLLSEFDHTNSLPYDFSQLSDLAQDQHHHHHHHHHQNHQLKVVTTVEEDSAIKLIHMLMTCADSLQRGNIQLAGSLIEGMQGLLTNMNTNSGIGKVAGYFIDALNRRIFGQNNIIHIENDVLYHHYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMHGLQWPALIQALALRPGGPPFLRLTGIGPPSHDDRDNLREIGLRLAELARSVNVRFAFRGVAAWRLEDVKPWMLQVSSKEAVAVNSIMQLHRLLGSEPDPNNPSAIETVLGWIRSLNPKIMTVVEQEANHNEDGFMDRFTEALHYYSTVFDSLEACPVEPDKAMAEIYLQREICNVVCCEGPARVERHEPLIKWRERLGKTGFRPLHLGSNAFKQASMLLTLFSAEGYCVEENQGSLTLGWHSRPLIAASAWQAVPETLRFDH* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0062 500 Pfam GRAS domain family 129 490 IPR005202 -
Tpr2g0062 500 Pfam Transcriptional regulator DELLA protein N terminal 18 85 IPR021914 -
Tpr2g0062 500 ProSiteProfiles GRAS family profile. 120 490 IPR005202 -
Tpr2g0062 500 PANTHER OS05G0574900 PROTEIN 11 492 - -
Tpr2g0062 500 Coils Coil 26 46 - -
Tpr2g0062 500 SMART DELLA_2 18 91 - -
Tpr2g0062 500 Gene3D - 16 81 IPR038088 -
Tpr2g0062 500 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 492 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0062 Tpr-Chr2 795563 797556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0062 17 490 GRAS Transcription Factor Family AT1G14920 48.532 2.86e-164 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr2g0062 GRAS 2.6e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0062 K14494 - gmx:100805968 749.199