Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0056 ATGGCCTTAAATAAGACAGGAAACTTGTTAGGTACCAATGCCGGAGACGAGCATGGCTTGTTTCCTCAATACAACCAACAAGAGTTACACAGCGGTATTACAAATGTACATCATAATAATATCCCTAAACATGTTGGGGGGAAAAATGCGGTGAATTTTGTTCATGATGGAAGAGTTTCTGTTTCACCCGATATACCTCAAAATCGCGAGAATAGGTTTGGATTGAATAAGGAGAACGGCCGTGTTAGATACGAAGACCTCACCAATATTTTAGGGTTGAAGAGAATGGACTCTGAGACTTCTTCTGAGATAGGTGATTTTATCCCTAAAAGACAGCCAGCAGCACAAGAGATTGAAAACGGCGTTTCTCCTAACATTTTTTGCAAAACTCAAAAGGGAGATGGCGACAACAGTGGCCGTGGTGCGTTGAAGAAGAGCTTTAGCGAAAAATTTAGTGACCAACATGGTACTAGGCCACCTGTATCACCGCCTATTTGCAGACATGAAAGATCTCATTCCAATGGATTTTCTGGTTCTGGACTTTTAGACGATACTTTATCTTCTGGGAAAATAAAGTTTCTTTGCAGCTTTGGTGGAAAAATATTACCAAGGCCCGGTGATAGTAAACTCAGATATGTTGGCGGAGAAACCCACATTATATCTATCCGAAAGGATATTTTATGGGAAGAGCTTATGAACAAGACTTTAGGTATTTGCAGTCAACCTCACACGATCAAATACCAGCTTCCGGGGGAGGATCTTGATGCTCTAATATCGGTTTCCTCTGATGAAGATCTTCAAAATATGATAGAGGAATATCATGGACTTGAAAGTCACGAAGGTTCTCAGAAACTTCGAATATTTTTAGTTCCTTTGGGTGAATCTGAAGAGACATCATCTACCGAGGCAAACACCGTTCTGCAGAATGATCCTGATTACCAATACGTTGTTGCTTTAAACGGCGTAATAGACCCTAGTCCTAAGAAAAACACCGGTGGACAGAGTTTGATAAACGAAGCAAATCAGCCAGTGACAACTTTCAATTTTACTCCAATAATTGTGGCTTCTACTTTGGAGACCAGGGACGGTAATAAACGTATTCATGCTTTAAATCCAGATGGAATTTTGAATGATCCCTTAAATCTTCAAAGTGCATTGCGAATTTCTCCTACTCCGGTTCAAGTTGCAGGTTCTAGTACAGGTTATGTTCAATTGCTTGGTAACAACTCATGCCAGGGAAGTATTGACAGCAATGCATCATATGTTACCGCTCAGGTAGACTCCGGAAACTCGAGCATAAACGCTGCTGATTGCCGATACCCTCAACAAGAATCTGTTACCTTGTTAAGTGACGGTCATCCTCGTCAACATGGTGACGTTGGTCAGCCGAAGAATCTCAATGGACAGTATTTTGACAACTACAATCCAGGCAATGGTTACAGTGATGAAGTTTTTGGTGGAACCTTGCATAACGATAGAATACTCCGCTCTGGAAATCCGATTGCTCAACCGGCCGAATCATATGGAATTAATAATGATCCGCCTCATGGGATGCCTCATGCTTTTTCTGATTCGCAGTTGCATGAGAGTGGAGCAAGGTCTGGTTACCGCTCACAAGAAGGAATTGCCCCGTCTTTCTCCTTGAACCTTGATAAGTCCCAATTATCTTCGATGTTAGGTATCTCACAAGTGAACCATATGGAGGGTCAACATGATCCCTTCCTCCATGATCCTCAAATACAAAGTAAGATACCAAATGTGGAGTCAGCTGAGATGCATAGACGGCAAGTTATGGCATCTTCATCTCCCTACTCGGAATCAGTAGGAATGAATGATCGTATTAATAAGGATAGCATTTTAACTGACAAAAAGTACCTTAATGCTCAAACTGACTTAAGTGGATCCGGCTTTGTAGAAAAGAACATCCAGGAACATTCTTTTAAATCAGAAAGGATGATGAGAAATGAAGAAAATAATCATATTCCGAAGAAGGATAACAAGGTTTACGAGGGAAATTCAACTGTCAATTATATGAGTGAATTGCATCTTTTGGATACATTCCCTACTAATGATATATGTGCTAAGATTGGTATGCAAAATAATCGGGAACAACCTTGTGAGGACATGCATCCTTCGACATCAGGCATGATGGGACTCTCTCTAAATAACCTTGTGGACAAGACCCCGTCTGATCTGAATCGTAAACAAGGAAATGATTTTTCAGCCAGAAACATTGATTTAAATGCTCCGATCTTAATACATCCAGAAAGCTCGTGTGGCAAAAGTTCTGAAAGGGATCATATGTTCAATTTTTCCTTTGATCCACATTCTCTTAAATCGGCACAAATTCAGCCTTCTCATAATCAGACCACTAAAGTTTTTCATGATAATCCAACAATAAACTCGGAAAGTTTGTATCCTGCTGTAGTTCATGATGATGTCCCTCCAAGCTTAAACTTGCCGGTTAGTGACCTGGATAATGCAAGCAACAATATTTCTTTTATGAAGGCGCCTTCTTTTCTCGATGACTGGCTTACAAGCACTGATCAAATGGCTGTTCAGTTTAAACACGAACATTCTGCCTCCGGACTGTCAAAAGTTGAAGATGTAATTTTAGGACAATCGAAAAATTCAGAAAGGTGTAATGAAGATGTGACTGGTGTTGTTCCTTCACATCAAAAGTCTTCAATAGTACACACCCCGCATAATTTTGATGAAGGTGAAAGTGATGTATCTCCATCTCATACGGAAGTAGAGAGCACCATTCTAGAGTCTGATCTCGAGGATTTTAAAGACGACCAAACCGAAATGAATGACTTCCTTTCTGATGTAATGATAGCAGAAATGGAGGCGAGCATATATGGTTTGCAGATAATTAAGAATGTTGATCTTGAAGAACTTATGGAGTTAGGATCTGGTACCTATGGAACTGTTTATCATGGAAAATGGCGAGGAACAGATGTTGCAATCAAGAGAATTAAAAAGAGCTGCTTTGCAGGGAGATCTTCTGAACAAGAACGGTTGGCAAAAGATTTCTGGAGAGAGGCACAGATCCTGTCAAATCTTCACCATCCCAATGTGCTCGCATTTTATGGAATCGTACCGGACGGAGATGGTGGAACCTTAGCAACTGTAACAGAATATATGGTTAATGGTTCCCTTAGGCATGTCCTTGTCAAGAACAACAGATTACTAGATCGTCGTAAAAAGCTTATAATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCATTCGAAGAATATTGTCCATTTCGATTTGAAGTGTGACAATTTACTTGTCAATCTAAGGGATCCACAACGACCCATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTTGTATCTGGGGGTGTGCGAGGAACCCTTCCATGGATGGCACCAGAGCTGTTGAATGGTAATAGCAGTCGAGTTTCCGAAAAGGTTGATGTTTTCTCGTTTGGCATCTCAATGTGGGAGCTATTGACAGGAGAGGAACCTTATGCAGATATGCATTGTGGTGCCATTATTGGCGGAATTGTAAAGAACACACTCCGACCACCAATTCCAGAACGATGTGATCCTGAATGGAGGAAGCTTATGGAAGAATGTTGGTCACGTGACCCCGAATGTCGACCATCATTCACCGAGATAACAAGCAGGTTAAGATCTATGTCTATGGCCAATCAACAAGGAAAGGGTAATTATCAGGCATGGCAGTTGAGACCTAGTAATGAATTTTGA 3759 0.4081 MALNKTGNLLGTNAGDEHGLFPQYNQQELHSGITNVHHNNIPKHVGGKNAVNFVHDGRVSVSPDIPQNRENRFGLNKENGRVRYEDLTNILGLKRMDSETSSEIGDFIPKRQPAAQEIENGVSPNIFCKTQKGDGDNSGRGALKKSFSEKFSDQHGTRPPVSPPICRHERSHSNGFSGSGLLDDTLSSGKIKFLCSFGGKILPRPGDSKLRYVGGETHIISIRKDILWEELMNKTLGICSQPHTIKYQLPGEDLDALISVSSDEDLQNMIEEYHGLESHEGSQKLRIFLVPLGESEETSSTEANTVLQNDPDYQYVVALNGVIDPSPKKNTGGQSLINEANQPVTTFNFTPIIVASTLETRDGNKRIHALNPDGILNDPLNLQSALRISPTPVQVAGSSTGYVQLLGNNSCQGSIDSNASYVTAQVDSGNSSINAADCRYPQQESVTLLSDGHPRQHGDVGQPKNLNGQYFDNYNPGNGYSDEVFGGTLHNDRILRSGNPIAQPAESYGINNDPPHGMPHAFSDSQLHESGARSGYRSQEGIAPSFSLNLDKSQLSSMLGISQVNHMEGQHDPFLHDPQIQSKIPNVESAEMHRRQVMASSSPYSESVGMNDRINKDSILTDKKYLNAQTDLSGSGFVEKNIQEHSFKSERMMRNEENNHIPKKDNKVYEGNSTVNYMSELHLLDTFPTNDICAKIGMQNNREQPCEDMHPSTSGMMGLSLNNLVDKTPSDLNRKQGNDFSARNIDLNAPILIHPESSCGKSSERDHMFNFSFDPHSLKSAQIQPSHNQTTKVFHDNPTINSESLYPAVVHDDVPPSLNLPVSDLDNASNNISFMKAPSFLDDWLTSTDQMAVQFKHEHSASGLSKVEDVILGQSKNSERCNEDVTGVVPSHQKSSIVHTPHNFDEGESDVSPSHTEVESTILESDLEDFKDDQTEMNDFLSDVMIAEMEASIYGLQIIKNVDLEELMELGSGTYGTVYHGKWRGTDVAIKRIKKSCFAGRSSEQERLAKDFWREAQILSNLHHPNVLAFYGIVPDGDGGTLATVTEYMVNGSLRHVLVKNNRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPIPERCDPEWRKLMEECWSRDPECRPSFTEITSRLRSMSMANQQGKGNYQAWQLRPSNEF* 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0056 1252 Pfam Protein tyrosine and serine/threonine kinase 967 1227 IPR001245 GO:0004672|GO:0006468
Tpr2g0056 1252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1089 1101 IPR008271 GO:0004672|GO:0006468
Tpr2g0056 1252 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 83 1243 - -
Tpr2g0056 1252 ProSiteProfiles Protein kinase domain profile. 964 1232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0056 1252 CDD PB1_UP2 194 289 - -
Tpr2g0056 1252 SUPERFAMILY CAD & PB1 domains 207 296 - -
Tpr2g0056 1252 ProSitePatterns Protein kinases ATP-binding region signature. 970 995 IPR017441 GO:0005524
Tpr2g0056 1252 Gene3D Transferase(Phosphotransferase) domain 1 1052 1250 - -
Tpr2g0056 1252 Pfam PB1 domain 207 291 IPR000270 GO:0005515
Tpr2g0056 1252 Gene3D Phosphorylase Kinase; domain 1 957 1051 - -
Tpr2g0056 1252 SUPERFAMILY Protein kinase-like (PK-like) 958 1226 IPR011009 -
Tpr2g0056 1252 PANTHER SERINE-THREONINE PROTEIN KINASE 83 1243 - -
Tpr2g0056 1252 SMART serkin_6 964 1233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0056 1252 Gene3D - 209 291 - -
Tpr2g0056 1252 SMART PB1_new 205 292 IPR000270 GO:0005515
Tpr2g0056 1252 CDD STKc_MAP3K-like 970 1227 - -
Tpr2g0056 1252 PRINTS Tyrosine kinase catalytic domain signature 1046 1059 IPR001245 GO:0004672|GO:0006468
Tpr2g0056 1252 PRINTS Tyrosine kinase catalytic domain signature 1083 1101 IPR001245 GO:0004672|GO:0006468
Tpr2g0056 1252 PRINTS Tyrosine kinase catalytic domain signature 1154 1176 IPR001245 GO:0004672|GO:0006468
Tpr2g0056 1252 PRINTS Tyrosine kinase catalytic domain signature 1198 1220 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0056 Tpr-Chr2 730220 738484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0056 188 320 MAP Kinase Kinase Kinase AT1G16270 62.406 3.56e-42 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Tpr2g0056 PK_Tyr_Ser-Thr 2.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0056 - - aprc:113862751 1571.6