Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0043 ATGGCTTGTAACACATTGATGAGTTCAGCTATTTCAGCTTTTCCATCATTTCTTTCTTCATCAAAATCAAGATTTGTAACTTCAACTTCATTTTCAAATTTTGCTTCTTGCAATGCATCTTCTTCTAAATTCAGCATGACTGCTGATAATTGGATGCCTGGTCAGCCTAGACCACCTTATCTTGATGGTTCAGCTCCTGGTGACTTTGGATTCGATCCTCTTCGTCTTGGCGAAGTACCAGAGAATCTTGAGAGATTCAAAGAGTCTGAACTCATTCACTGCAGATGGGCAATGCTTGCTGTTCCAGGGATTTTGATACCAGAGGCATTAGGATTAGGAAATTGGGTAAAAGCACAGGAATGGGCAGCACTTCCTGGAGGACAAGCAACCTACCTAGGCAACCCTGTTCCATGGGGTACCCTACCTACCATTTTGGTCATTGAATTCCTTTCTATTGCTTTTGTTGAGCACCAAAGGAGTATGGAGAAAGACCCTGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGTTACTCTAAAGACCCTAAAAAGTTCCATGAATACAAAATCAAAGAAGTTAAGAATGGACGTCTTGCTTTGTTGGCTTTTGTTGGAATCTGTGTTCAACAATCAGCTTATCCAGGCACTGGACCTTTGGAGAATTTGGCTACTCACTTGGCTGATCCATGGCACAACAACATTGGAAATGTTCTTATTCCCCCTCAATAG 735 0.419 MACNTLMSSAISAFPSFLSSSKSRFVTSTSFSNFASCNASSSKFSMTADNWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILIPEALGLGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKIKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGNVLIPPQ* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0043 244 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 21 237 IPR001344 GO:0009765|GO:0016020
Tpr2g0043 244 Pfam Chlorophyll A-B binding protein 58 212 IPR022796 -
Tpr2g0043 244 Gene3D Chlorophyll a/b binding protein domain 52 238 - -
Tpr2g0043 244 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 21 237 - -
Tpr2g0043 244 SUPERFAMILY Chlorophyll a-b binding protein 46 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0043 Tpr-Chr2 583253 585932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0043 1 199 Chloroplast and Mitochondria Gene Families AT3G54890 77.500 1.05e-104 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0043 K08907 - gmx:100800350 425.631