Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0032 ATGGGGAAAAAAGGGAGTTGGTTTTCTGCAGTGAAGAAAGTTTTCAGTCATGATTCAAGAAAAGACAAGAAAAGTAAGAAATCAAAGAAAAAAAGTACTCAAAAGGACTTAGAAGTGGAATCAGAAGAAGCACAAGTTGTTGTTCCACAAATAGAAGATGTGAAATTAAGTGAGGTAGAGAATGAACAAAATAAACAAGCAATTTCTCTTGCTTTTGCTACTGCTGCCGCGGCAGGGGCTGCTGTTGCTGCCGCTAAGGCTGCTGCTGAAGTTGTTCGTCTAACTAGCATGCCTCATTTCCCCGCAAAGACTAAGGAAGAATTGGCTGCTATCAAGATTCAGACAGCGTTCCGCGGATATTTGGCGAGAAGAGCGTTGCGAGCCTTGAGAGGCTTGGTGAGGTTGAAGACATTGGTACAAGGACAATCAGTTAAAAGGCAAGCAGACAGCACCTTAAGATGTATGCAAACTTTAGCAAGATTGCAGTCACAGGTTCGCGAAAGGCGAATTCGAATGTCCGAGGAGAATCAGGCTCTTCAGCGCCAATTACAACAGAAACATGAAAAAGAACTCGGGAAGTTGCAAGCTTCTGTACAGGTTGGAGAAGAATGGGATGCTAGCTTGCAGTCAAAGGAACAAATTGAAGCAAAATTGTTGCAAAGGCAAGAAGCTGCTTTCAAAAGAGAGAGGGCTTTGGCTTATTCATTCTCACATCAGAAAACATGGAAGAATTCTTCAAAATCTATGAACCAAACATTTATGGATCCAAGCAATCCTCACTGGGGATGGAGTTGGTTAGAGAGATGGATGGCAACTCGACCGTGTGAAGGCGAAAGCATCATTATGAATCACAATGATCATGCATTTATTAAGAGTTCTTCATCAAAGCATAGCCATGTTCTTAATTATGATAACAAACCTTCCCCAACTAGCCAAAAATCAAGAAGACAAACCATTCACAATTCTCCTTCAACTTCAAAGACAAGGCCACCAAGCTCAAAGGGTGGCGAAATTACTGACGACTCAAGAAGCATGTTTAGTGCTCAATCCGACCGGTATCGAAGATATAGTAGCATTGCAGGATCATCCGTTAGAGACGATGCGAGCATTGAAAGCTCGCCGGTGTTTCCTAGTTACATGGCACTCACAAGTTCAGCAAAAGCAAAGTCCAAATTAATGCAAAGACAATCACCATCTTCAATTTCGGCAAGGAAGAGGCTTTCTTTCCCTGCTTCTCCGATTGGTTCAAGAAGGCATTCCGGTCCACCGAAGGTGGAAATATAA 1284 0.426 MGKKGSWFSAVKKVFSHDSRKDKKSKKSKKKSTQKDLEVESEEAQVVVPQIEDVKLSEVENEQNKQAISLAFATAAAAGAAVAAAKAAAEVVRLTSMPHFPAKTKEELAAIKIQTAFRGYLARRALRALRGLVRLKTLVQGQSVKRQADSTLRCMQTLARLQSQVRERRIRMSEENQALQRQLQQKHEKELGKLQASVQVGEEWDASLQSKEQIEAKLLQRQEAAFKRERALAYSFSHQKTWKNSSKSMNQTFMDPSNPHWGWSWLERWMATRPCEGESIIMNHNDHAFIKSSSSKHSHVLNYDNKPSPTSQKSRRQTIHNSPSTSKTRPPSSKGGEITDDSRSMFSAQSDRYRRYSSIAGSSVRDDASIESSPVFPSYMALTSSAKAKSKLMQRQSPSSISARKRLSFPASPIGSRRHSGPPKVEI* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0032 427 MobiDBLite consensus disorder prediction 16 42 - -
Tpr2g0032 427 Gene3D - 92 134 - -
Tpr2g0032 427 ProSiteProfiles IQ motif profile. 106 134 IPR000048 GO:0005515
Tpr2g0032 427 MobiDBLite consensus disorder prediction 298 352 - -
Tpr2g0032 427 Coils Coil 162 189 - -
Tpr2g0032 427 MobiDBLite consensus disorder prediction 385 427 - -
Tpr2g0032 427 MobiDBLite consensus disorder prediction 385 406 - -
Tpr2g0032 427 PANTHER IQ-DOMAIN 5-RELATED 1 426 - -
Tpr2g0032 427 Pfam IQ calmodulin-binding motif 109 127 IPR000048 GO:0005515
Tpr2g0032 427 PANTHER PROTEIN IQ-DOMAIN 1-LIKE 1 426 - -
Tpr2g0032 427 SMART iq_5 105 127 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0032 Tpr-Chr2 473876 477799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0032 1 426 IQD Protein Family AT5G03040 47.289 1.23e-120 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0032 - - lja:Lj0g3v0301539.1 507.679