Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0022 ATGGATTCTACATCTCCAGCCAAGGAAAACAATCATGATAAGGGTTCCTCCCTTGAATTAGATAATGGGCAATCCGCCCCTAGCCCAATCAGTAAGATGATCGCCGTGGCATCTATCGCTGCTGGTGTTCAATTTGGATGGGCTCTTCAACTTTCTCTCTTGACCCCATACGTGCAGACTCTTGGAGTTCCGCACGCATGGGCCTCTTTCATTTGGCTATGTGGCCCAATATCTGGACTTCTTGTCCAGCCTATATGTGGTTATTATAGTGACCGTAGCACTTGCCGGTTTGGTCGTCGTCGTCCTTTCATCTTTTTTGGATCTCTAGCTGTTGCTATTTCTGTCTTCCTCATTGGATATGCTGCTGATCTCGGTCATTCATTGGGTGATGACATAACTAAAAAAACTAGACCACGAGCTGTTGCTTTCTTCGTCCTAGGATTTTGGATCCTTGACGTAGCAAACAACATGCTCCAGGGACCGTGTCGTGCTTTCCTCGCTGACCTTGCTGCGGGTGATGAGAAAAAGACGAGAACAGCTATGGGTTACTTCTCTTTCTTCATGGCCCTAGGTAACATCCTTGGATACGCCGCAGGTTCCTACAGCAAACTCCATAATTGGTTCCCCTTCACTGAAACCGAAGCATGTAACGTCTTCTGTGCGAATCTTAAGAGTTGTTTCTTTTTCTCCATTATTCTCTTGGCAGTCCTTGCTGGTACCGCCCTCATTATCGTCGAGGACAAACCAATGGAGAAGCATATGGTGAGTGATGACGACGACATGCAGGTTTCTTGCTTCGGAGAAATGTTCGGTGCAATGAAGGAATTGAAGAGGCCAATGTGGATATTGATGTTAGTGACATGCGTAAACTGGATCGCGTGGTTCCCATTCTTCTTGTTCGATACCGATTGGGTTGGTCATGAGGTGTATGGCGGAGTTGCAGGAGAGCCAGCATATGACAATGGAGTGAGAGCTGGTTCTTTAGGACTTATGCTTAATGCTATTGTTCTTGCTTTCATGTCTTTGGCAGTAGAACCATTGGGAAAAATGGTTGGAGGAATCAAGAGACTTTGGGGTATCGTTAATTTCATTCTGGCTATCGGCTTGGCAATGACCGTCGTCATTACTAAAATTGCAGAACAAGAACGTCAGCTTAGTGGTGGTGCCACCATTGGAAATCCTTCCGAAGGTGTCAAGATCAGCGCCATGCTCTTCTTCGCAGTTCTTGGTATCCCTATGGCGATTACATTCAGTGTTCCTTTTGCTCTAGCATCAATTTATTGCAGTGCTTCAGGGGCAGGACAAGGTTTATCGTTGGGTGTTTTGAATCTTGCAATTGTGGTACCACAGATGTTTGTGTCAACACTAAGTGGACCTTGGGATGCTCTATTTGGTGGTGGTAATTTGCCGGCATTCATCGTGGGTGCGGTGGCTGCCGTCATCAGTGCCATATTGGCGATGGTTATGTTGCCCTCGGTCAAACCGGATGATGAGGCCAAGGTTAAACTTGGTGGCAGTTTCCATTGA 1527 0.4656 MDSTSPAKENNHDKGSSLELDNGQSAPSPISKMIAVASIAAGVQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPICGYYSDRSTCRFGRRRPFIFFGSLAVAISVFLIGYAADLGHSLGDDITKKTRPRAVAFFVLGFWILDVANNMLQGPCRAFLADLAAGDEKKTRTAMGYFSFFMALGNILGYAAGSYSKLHNWFPFTETEACNVFCANLKSCFFFSIILLAVLAGTALIIVEDKPMEKHMVSDDDDMQVSCFGEMFGAMKELKRPMWILMLVTCVNWIAWFPFFLFDTDWVGHEVYGGVAGEPAYDNGVRAGSLGLMLNAIVLAFMSLAVEPLGKMVGGIKRLWGIVNFILAIGLAMTVVITKIAEQERQLSGGATIGNPSEGVKISAMLFFAVLGIPMAITFSVPFALASIYCSASGAGQGLSLGVLNLAIVVPQMFVSTLSGPWDALFGGGNLPAFIVGAVAAVISAILAMVMLPSVKPDDEAKVKLGGSFH* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0022 508 MobiDBLite consensus disorder prediction 1 24 - -
Tpr2g0022 508 TIGRFAM GPH_sucrose: sucrose/H+ symporter 29 495 IPR005989 GO:0005887|GO:0008515|GO:0015770
Tpr2g0022 508 Pfam MFS/sugar transport protein 37 293 - -
Tpr2g0022 508 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 22 499 - -
Tpr2g0022 508 MobiDBLite consensus disorder prediction 1 16 - -
Tpr2g0022 508 SUPERFAMILY MFS general substrate transporter 33 495 IPR036259 -
Tpr2g0022 508 PANTHER SUGAR TRANSPORTER 22 499 - -
Tpr2g0022 508 CDD MFS_SLC45_SUC 33 486 - -
Tpr2g0022 508 Gene3D MFS general substrate transporter like domains 30 491 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0022 Tpr-Chr2 353853 356328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0022 9 508 Sucrose Transporter Gene Family AT1G22710 63.458 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0022 K15378 - gmx:100784153 743.421