Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0014 ATGGAATTTGCTACTGTTAGTGAAGCTTATGAATTTTATTACCGGTATGGTAAATGTAAGGGTTTTGCTATTAGGAAAGCTTCTAGTAGGATAAAAGAGTTAGATGGTAATAAAGTAACACAAATGAAGCAGTTTGTTTGCAACAGACATGGTTTAAGAGAGAAGAAACATTTAACCAGGTTAGATAGGAAAGTAGAACATAGACGTTTGAGCCGTACAAATTGTGAAGCTAGGTTTCGTGTGCAATACAGAAAACAAAAGGATAGATATGTAGTTACTGCTTTCGTAGAGTGTCATAACCATGAATTAACCCCAGCTAGGTTTGTTCACCTGCACCCTGTTTATCGTAAAATATCTGAAGCAGATAAGGCTCAGATTGATGGTCTTCAAACACGTGGAATTAGAACTTGTCATATAATGGGGTACATGATTGCCCAGAAGGGTGGATATGCTAGTGTTGGATTTACAAAGAAAGATTTGTACAATTATTTTGATAAAAAAATGTGTGAGTGTATTAAAGATGGTGATGTTGTCGCTTCTTTAAATTATCTTAATGTAAAGTCGTCTACTGATCCCATGCTATATGCTGAGTATGCCGTCGACAATAGTAATGGACGAATGAGGTCTCTATTTTGGGCTGATGGCAGTAGCAGATCAGACTACTTTTGTTTTGGTGATGTGCTTGCCTTTGACACGACTTACCGGAAGAATAAATACAACTATCCATTGGTTGTATTTTCAGGGTGTAACCACCATTCTCAGACAGTAATTTTTGGTGCTGCATTGGTAGCAGATGAAACGACGGAGACGTACAAGTGGGTGTTGAATTGTTTTTTAGAGTGCATGGAAGGTAAACAACCAAAAGCAGTGGTAACAGATGGAGATGGGGCAATGAGGGAGGCCATAAAACAGATTTTTCCCGATGCCACCCACAGGTTATGTGCTTGGCATTTGAATAAGAATGCAGTTGAGAATGTGAAAGATAATCCAGAATTTTTGGACGGTTTTCAAAAAGCCATGTACTCAAATTTCACAAAGGATGAATTTGAAGAGTATTGGTCAGAGCTAATTAAAGAAACTGAAGTGGAACAACATCCATGGGTTGTCAAAACTTATGAGAATAGGTCACTATGGGCAACTGGATATCTACGTGATCAGTTTTTTGGACGTATAAGGACTACGTCTCAATGTGAAGCTGTTAATGCAATAATAAAGACTTATGTCAGGACGAAAGGCTGCATTTTTGAATTCATGCATAATTTTGATCAGGTTTTGAGAGATTACAGAAATAATGAATTGGAAGCTGATTTTAAGTCAAAGTTTACGGTACCTGTGTTGACAACTCAACTGCGTGTGATTGAGAGTGATGCCGCCAATACTTATACTGCGGAGATTTTCAAAGAAGTTAAAGAGCAAATTCTGAAGGCTGGTGCATTGATAGTTAAGCATAAAAGTGATCACGGGGATACAAAGATTTATACATTAACAAAATTTTGTAACGATACATATGAAAGGAAAGTTGTATTTGATGGTACCACATTGCAATGTTCGTGTAAGTTGTTTGATTCTCGCGGTGTTCCATGTTCTCATATATTTTATGTCATGAAGGATGAACATGTTGATCATATTCCTAGGCCCTTGGTATTGTCGCGATGGACCAAGGATGCCAAAATTGAGTATTTGAACAACATGGAATGTAATGGTGATGTTGATTCGAACGTAGTTGAGGAAGCTCGTTTTGGTGCATATTGTTCGGCCTTTACAAGTTTTTGCAAAGAAGCTGCAAAAAAGAATGGTGTGTATGGCCAAATTTTGGATGACATTATGAAATTACAAAAAAAGTACTGCATTAATGATGATCCTATTATTGGGACACAAAATCCAGCAGTCGGTGATCCGGTGGCGGTTAAGAGTAAAGGTGCTCCAAAGAAAAAAAAGAAAGAACCAAAATCTGTCAGGCGATGTGGAAAATGCAACGCTACAACTCATAATGCGAGGACATGTTCCGAGGGTACACAAAAAGCGACAGAACCAATAGTTGATTTGCAGTCGGTGTCGATATCTGATGCTATAAGCCAAATGGATGAGAAAAAGAAAAGAAAAGCAACCTGCAATGTTGACAGAAGTGTGCAAAAGAAGGGTTCACGTCCACCGATACACCGTGGCGCTAAGGCCACAGTGACAACACAAGCAGACACAAATGGATGTTACAATCAAATGCATTTCCAAGCACAAATGGATGTTACAGGCACAAGCAGACATTTAAATGCAATGTGTGGAGTTCAACCTGTTATGCCGATGGTACCTCATATGTTTCAACCAATGCATTTGCAACCCGTATACCCAATGTATGGAATGAGTGTTGGGCAAACTGCAAGTTCGTGCTACGGTATGCTACAACAGAGTGTCGGGCAATCTTCACGTTCGTGCTACAGTCTGCTACAACAAGTTGAAAAGGCTACTACTGATGATTGA 2475 0.3887 MEFATVSEAYEFYYRYGKCKGFAIRKASSRIKELDGNKVTQMKQFVCNRHGLREKKHLTRLDRKVEHRRLSRTNCEARFRVQYRKQKDRYVVTAFVECHNHELTPARFVHLHPVYRKISEADKAQIDGLQTRGIRTCHIMGYMIAQKGGYASVGFTKKDLYNYFDKKMCECIKDGDVVASLNYLNVKSSTDPMLYAEYAVDNSNGRMRSLFWADGSSRSDYFCFGDVLAFDTTYRKNKYNYPLVVFSGCNHHSQTVIFGAALVADETTETYKWVLNCFLECMEGKQPKAVVTDGDGAMREAIKQIFPDATHRLCAWHLNKNAVENVKDNPEFLDGFQKAMYSNFTKDEFEEYWSELIKETEVEQHPWVVKTYENRSLWATGYLRDQFFGRIRTTSQCEAVNAIIKTYVRTKGCIFEFMHNFDQVLRDYRNNELEADFKSKFTVPVLTTQLRVIESDAANTYTAEIFKEVKEQILKAGALIVKHKSDHGDTKIYTLTKFCNDTYERKVVFDGTTLQCSCKLFDSRGVPCSHIFYVMKDEHVDHIPRPLVLSRWTKDAKIEYLNNMECNGDVDSNVVEEARFGAYCSAFTSFCKEAAKKNGVYGQILDDIMKLQKKYCINDDPIIGTQNPAVGDPVAVKSKGAPKKKKKEPKSVRRCGKCNATTHNARTCSEGTQKATEPIVDLQSVSISDAISQMDEKKKRKATCNVDRSVQKKGSRPPIHRGAKATVTTQADTNGCYNQMHFQAQMDVTGTSRHLNAMCGVQPVMPMVPHMFQPMHLQPVYPMYGMSVGQTASSCYGMLQQSVGQSSRSCYSLLQQVEKATTDD* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0014 824 Pfam FAR1 DNA-binding domain 11 104 IPR004330 -
Tpr2g0014 824 ProSiteProfiles Zinc finger SWIM-type profile. 503 539 IPR007527 GO:0008270
Tpr2g0014 824 MobiDBLite consensus disorder prediction 705 725 - -
Tpr2g0014 824 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 662 IPR031052 GO:0006355
Tpr2g0014 824 Pfam MULE transposase domain 227 321 IPR018289 -
Tpr2g0014 824 PANTHER OS02G0262500 PROTEIN 1 662 - -
Tpr2g0014 824 SMART 26again6 514 541 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0014 Tpr-Chr2 251584 254226 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g0014 MULE 8.3e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0014 - - ccaj:109792835 819.305