Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0005 ATGGAACAGAAACATGTTCTTTTGTCAGCATTGAGTGTTGGGGTTGGATTAGGTGTTGGACTTGGATTAAGTTCAGGACAAACTGTTCAGAAATGGGTTGGAGGGAATCGCGATTTCGACGAGGTTTCTGGTGAGCAGATTGTTGAAGAACTTAAGAGACTTTTGGTTGATGGAAAAGATAGCAAAGTTACATTTGATGAGTTTCCTTATTACTTAAGCGAAAGAACTCGAGTTTTGTTGACAAGTGCTGCATATGTTCATTTAAAACATCTTAACTTTTCCAAGCACACCAGAAATCTCTCACCAGCAAGCAGGGCTATTTTACTCTCTGGTCCTGCAGAACTTTATCAGCAAATGCTTGCCAAAGCTTTAGCTCATTACTTTGAATCGAAGTTGCTATTGTTAGATATTACTGATTTCTCTCTTAAGTTGCAGAGCAGATTTGGATGTGCAAGAAAAGTACCGTCTTTGAGAAGGTCAATATCCGAGATGACTGTGGAGAGAATGTCAGGTTTATTTGGTTCGTTTTCAATGATGTCTTCCACCGGCGAAGCTAGAGGAACTCTGCGTCAACAAACCGTTGATAGTTCGAATAATCCTCCGTGTCTTCGGAGGAATGCTTCTGCTGCGTCAGATCTAAGTAGCACTTCTTCCCAAAGTGGTTCAATAAATCCAGCTCCTTTAAGACGAACAAGTAGCTTGTGTTTTGATGAAAAGCTCTTTGTGCAATCACTTTACAAGGTTTTGGTTTCTATCTCAGGAACCGATTCTATCATTTTATACATAAGGGATGTTGAGAAGCTTGTTCTCAGATCACCAAGGTTATTTAATTTACTACAAAAAATGATAAAGAAAATATCAGGCTCGGTATTGATACTCGGTTCCCAGATATTATTAGATTTAGAAGGTGATTGCAAAGAATTAGACGAAAGGATCGCTAGGTTATTCCCTTATAACATTCAGATCAAAGCTCCTGAAGATGAAACTCATCTCGGTAGTTGGAAATGCCAACTCGAAGAAGACATGAAAATCATTCAGTTTCAAGATACTCGAAACCACATTGCTGAAGTACTTGCAGAAAACGACATTGACTGCGACGACTTGAATTCAATATGCCATGCAGACACTATGATACTTAGTAATCATATTGAAGAAATTGTTATATCCGCTATTTCTTACCATTTGATGAATACCAAAGTACCTGAATACCGAAACGGAAAGCTAGTTATCTCGGCAAATAGTTTGTCCCAGGGATTGAGTCTGTTCCAAGAAGGAAAGAATAGCGGAAATCTGAAAACTAATGATTCGAATAAGGAAAATGTTGTTGAAGATATTGCCGGTGCGAAGAATGATGTGCGGAGTGACAACCAAGCACCTGAAAACAAAAATGATACATCCATTCCTGTAACGAAAAAAGAAGGCGAAAATTCTACGCCTGCAAAAGTGGAAGTTCCTGACAACGAGTTCGAAAAGCGAATTAGACCAGAGGTTATCCCTGCAAATGAGATAGGTGTTACATTCGCAGATATCGGTGCATTGGATGAGATAAAAGAATCACTTCAAGAGCTGGTAATGCTTCCCCTTAGAAGACCTGACCTTTTCAAAGGTGGACTTCTAAAGCCATGTAGAGGCATACTTCTTTTCGGACCTCCCGGCACCGGAAAAACAATGCTAGCAAAAGCGATTGCGAACGAGGCAGGAGCAAGTTTTATCAACGTTTCAATGTCCACCATCACTTCCAAATGGTTCGGAGAAGACGAGAAGAATGTTCGAGCTTTGTTCACACTAGCAGCTAAGGTTGCTCCGACGATTATATTTGTGGATGAAGTTGACAGCATGCTCGGTCAGCGTACTCGAGTTGGAGAACACGAGGCCATGAGGAAGATTAAAAATGAATTCATGACACATTGGGATGGACTATTATCAGGACCTAATGAACAGATTCTCGTTCTTGCTGCTACAAACAGACCATTCGATCTCGATGAAGCAATTATAAGACGATTCGAGCGCAGGATCATGGTTAGTCTACCATCTGTTGAGAACAGGGAAATGATCCTTAAAACTCTTCTGTCGAAGGAAAAACACGAAAACTTAGACTTCAAAGAACTTGCAATCATGACAGAAGGATTTAGTGGAAGTGATCTTAAGAATTTGTGCATCACTGCAGCTTATCGACCTGTTAGGGAGTTAATACAGCAGGAGCGAAATAAGGAAATGGAAAAGAAGAAAAAAGAGGCCGAAAGTGTCAGCTCAGATGATGCTTCAAATAATAATGATAACGAAGAACGAGAAATTACCTTGAGGTCTTTAAACATGGAAGACATGAAACAAGCTAAGAATCAGGTTGCTGCGAGTTTTGCGTCAGAAGGATCGGTAATGGCCGAGCTAAAACAATGGAATGAATTGTATGGAGAAGGAGGATCAAGGAAGAAACAACAACTCACATACTTCCTTTAA 2457 0.4009 MEQKHVLLSALSVGVGLGVGLGLSSGQTVQKWVGGNRDFDEVSGEQIVEELKRLLVDGKDSKVTFDEFPYYLSERTRVLLTSAAYVHLKHLNFSKHTRNLSPASRAILLSGPAELYQQMLAKALAHYFESKLLLLDITDFSLKLQSRFGCARKVPSLRRSISEMTVERMSGLFGSFSMMSSTGEARGTLRQQTVDSSNNPPCLRRNASAASDLSSTSSQSGSINPAPLRRTSSLCFDEKLFVQSLYKVLVSISGTDSIILYIRDVEKLVLRSPRLFNLLQKMIKKISGSVLILGSQILLDLEGDCKELDERIARLFPYNIQIKAPEDETHLGSWKCQLEEDMKIIQFQDTRNHIAEVLAENDIDCDDLNSICHADTMILSNHIEEIVISAISYHLMNTKVPEYRNGKLVISANSLSQGLSLFQEGKNSGNLKTNDSNKENVVEDIAGAKNDVRSDNQAPENKNDTSIPVTKKEGENSTPAKVEVPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLSGPNEQILVLAATNRPFDLDEAIIRRFERRIMVSLPSVENREMILKTLLSKEKHENLDFKELAIMTEGFSGSDLKNLCITAAYRPVRELIQQERNKEMEKKKKEAESVSSDDASNNNDNEEREITLRSLNMEDMKQAKNQVAASFASEGSVMAELKQWNELYGEGGSRKKQQLTYFL* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0005 818 CDD AAA 543 676 - -
Tpr2g0005 818 MobiDBLite consensus disorder prediction 459 473 - -
Tpr2g0005 818 MobiDBLite consensus disorder prediction 736 762 - -
Tpr2g0005 818 Pfam AAA+ lid domain 697 740 IPR041569 -
Tpr2g0005 818 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 818 - -
Tpr2g0005 818 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 818 - -
Tpr2g0005 818 Gene3D - 504 676 IPR027417 -
Tpr2g0005 818 SMART AAA_5 541 678 IPR003593 -
Tpr2g0005 818 Pfam ATPase family associated with various cellular activities (AAA) 545 675 IPR003959 GO:0005524|GO:0016887
Tpr2g0005 818 Coils Coil 727 747 - -
Tpr2g0005 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 504 732 IPR027417 -
Tpr2g0005 818 ProSitePatterns AAA-protein family signature. 648 667 IPR003960 GO:0005524|GO:0016887
Tpr2g0005 818 MobiDBLite consensus disorder prediction 448 484 - -
Tpr2g0005 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 373 IPR027417 -
Tpr2g0005 818 Gene3D - 677 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0005 Tpr-Chr2 96589 103455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0005 461 734 Calmodulin-binding Proteins AT3G56690 36.042 4.10e-41 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0005 - - gmx:100817952 1309.28