Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0004 ATGACAGGAACAAGTAAGAAATTTGCAATAGGAATCGACCTAGGAACAACATATTCTTGTGTTGCAGTGTGTAGGAATGATAAGGTAGAGATCATAGTGAACGACCAAGGAAACAGAACAACACCTTCTTATGTTGCCTTCACTGATTCTCAAAGGATGATTGGTGATTATGCTTTCAATATGGCTGCTTGCAACCCAACCAATACTGTCTTTGATGCGAAGAGGCTAATTGGTAGGAAATTTTCTGACACTATAGTTCAAAGTGATATGAAATTGTGGCCATTTAAAGTAATTGGTGGCCTCGATGACAAACCCATGATTGTTGTCAATTACAACAATGAAGAAAAACAATTTTCTGCCGAGGAAATATCATCCATGGTATTGGCAAAAATGCGTGAGATTGCAGAAGCTTACCTCGGATCAATAGTGAAGGATGTTGTTATAACTGTTCCTGCTTATTTCAATAACTCACAACGCGAAGCTACAAGAGATGCAGGTGTTATTGCAGGCCTCAATGTTATGCGAATAATCAACGAGCCTACTGCAGCAGCAATTGCATATGGCCTTGACATGAATCCATTTAATCATGGATGTAGACATGTTTTTATTTTTGATTTAGGTGGTGGAACTTTGGATGTGTCTATTGTCACATTTGAGAAAGATGACATAAAAGTTAAGGCTCATGCCGGAGACACTCACCTCGGAGGACAGGACTTTGATAATACAATGGTGAACCATTTTGTGAAGGAGTTCTCAAGGAGGCATAAAATTGACATTAGTGGAGATCCAAGAGCCATGAGGAGGTTAAAGTCTGCTTGTGAGAAAGCAAAGAGAATACTTTCTTCCAATACTGACACCGCAATTGAAATAGATTGTTTAAAACAAGGTATAGATTTCTACTCACAAATTAGTCGCACAAAGTTTGAGGAACTCAACAAGAATCACTTTAGCAAGTGCATGGAGATTGTCGAGAAGTGCCTAATAGATAGCGGTGTAGAGAAGAGTAGAATTGATGATGTTGTCCTTGTTGGTGGCTCTACAAGGATTGTAAAATTGCAAGAACTATTGAGAGATATCTTTGAAGGAAAGGAATTATGCAAAAGAATCAATGCCGATGAGGCGGTTGCATATGGTGCTGCTGTCCAAGCATCTATATTGAGTGGGGAATTCAATGAAAAGGTTCAAGATTTGAAGGAAGTCATTCCTTTATCCCTTGGATTGGAAACACATGGGGGGATCATGAAAGTATTAATTCCTAGGAATACCACAATTCCTACAAGCAAGGAACACATATTCACGACGCATTTTAACAACCAAACCAATATTCTAATTCATGTTTATGAGGGTGAGAGGCAAACAACTAGAGACAACAACTTGCTAGGAAAATTTGTGTTGGAAATTCCTCCAGCTCCGGCAGGTCTTCCTCAAATCAAGATTAGCTTCCAAATTGATGAGGATGGAATCTTACACGTCTCTACCTCCGAAAAATTCTCCGGAGTTAACAAGAAGGTTAAAATAATAAGTGATAAGGGAAGACTTTCAAAGGAGGAAATTGAGAGGATGATCAAAGAAGCTGAGAAGTACAAAGATGACGACAAGAGGTATAGAATGAAGGTGGAAGCAAGAAACGCGTTAGAGAAGTATGCATACGATATGAGTAATGCCATAAATGATAAAGTGATTAGCTCAAAGCTTTCCTTAAAAGACAAGAAAGTGATCAATGAAGCAATTGATTTGGTCTTAATGTGGCTAGATGTCAATGTGGTTGCAGAGCAATGTGATTTTGAATATTATAGAACCATTCTTTCAAATGTGTTTGATCCAATTATTGAGAAGATGATAAACGATGAGGAACTCGGTACTGTTGATATTAAAAAGAATCGTTGGTCAAAATTATTAGCAAAATATGCTTTCGAGATAGGGTGTTCAGCTGCAATTATTACATGCAAATATGCATGGTTATTAATTGTACTTTAA 1977 0.3778 MTGTSKKFAIGIDLGTTYSCVAVCRNDKVEIIVNDQGNRTTPSYVAFTDSQRMIGDYAFNMAACNPTNTVFDAKRLIGRKFSDTIVQSDMKLWPFKVIGGLDDKPMIVVNYNNEEKQFSAEEISSMVLAKMREIAEAYLGSIVKDVVITVPAYFNNSQREATRDAGVIAGLNVMRIINEPTAAAIAYGLDMNPFNHGCRHVFIFDLGGGTLDVSIVTFEKDDIKVKAHAGDTHLGGQDFDNTMVNHFVKEFSRRHKIDISGDPRAMRRLKSACEKAKRILSSNTDTAIEIDCLKQGIDFYSQISRTKFEELNKNHFSKCMEIVEKCLIDSGVEKSRIDDVVLVGGSTRIVKLQELLRDIFEGKELCKRINADEAVAYGAAVQASILSGEFNEKVQDLKEVIPLSLGLETHGGIMKVLIPRNTTIPTSKEHIFTTHFNNQTNILIHVYEGERQTTRDNNLLGKFVLEIPPAPAGLPQIKISFQIDEDGILHVSTSEKFSGVNKKVKIISDKGRLSKEEIERMIKEAEKYKDDDKRYRMKVEARNALEKYAYDMSNAINDKVISSKLSLKDKKVINEAIDLVLMWLDVNVVAEQCDFEYYRTILSNVFDPIIEKMINDEELGTVDIKKNRWSKLLAKYAFEIGCSAAIITCKYAWLLIVL* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0004 658 Gene3D - 71 126 - -
Tpr2g0004 658 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 4 621 - -
Tpr2g0004 658 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 540 618 IPR029048 -
Tpr2g0004 658 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Tpr2g0004 658 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Tpr2g0004 658 Gene3D - 543 615 IPR029048 -
Tpr2g0004 658 SUPERFAMILY Actin-like ATPase domain 199 386 IPR043129 -
Tpr2g0004 658 PRINTS 70kDa heat shock protein signature 8 21 - -
Tpr2g0004 658 PRINTS 70kDa heat shock protein signature 36 48 - -
Tpr2g0004 658 PRINTS 70kDa heat shock protein signature 58 66 - -
Tpr2g0004 658 PRINTS 70kDa heat shock protein signature 146 166 - -
Tpr2g0004 658 PRINTS 70kDa heat shock protein signature 209 219 - -
Tpr2g0004 658 PRINTS 70kDa heat shock protein signature 337 353 - -
Tpr2g0004 658 PRINTS 70kDa heat shock protein signature 369 389 - -
Tpr2g0004 658 PRINTS 70kDa heat shock protein signature 394 413 - -
Tpr2g0004 658 PRINTS 70kDa heat shock protein signature 474 490 - -
Tpr2g0004 658 Gene3D Actin; Chain A, domain 4 235 318 - -
Tpr2g0004 658 Gene3D - 10 383 - -
Tpr2g0004 658 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tpr2g0004 658 Pfam Hsp70 protein 9 612 IPR013126 GO:0005524|GO:0140662
Tpr2g0004 658 PANTHER HEAT SHOCK PROTEIN 70KDA 4 621 IPR013126 GO:0005524|GO:0140662
Tpr2g0004 658 Gene3D - 192 366 - -
Tpr2g0004 658 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 542 IPR029047 -
Tpr2g0004 658 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 397 546 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0004 Tpr-Chr2 61746 64024 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0004 1 613 Calmodulin-binding Proteins AT3G12580 66.396 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0004 K03283 - gmx:100783822 829.706