Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0001 ATGGCAGGAACAAGTAAGAAAGTTGCAATAGGAATCGACCTAGGAACAACATATTCTTGTGTTGCTGTGTGGAGGAATGATCAGTTAGAGATCATAGTTAACGAGCAAGGGAACAGAATAACACCTTCTTATGTTGCCTTCACCGACTCTCAAAGGATGATTGGTGATCCTGCTTTCAACAAGGCTGCTTACAACCCAACCAACACTGTCTTCGATGCTAAGAGGCTAATTGGTAGGAGGTTTAGTGACCCTATAGTTCAAAATGATATGAAATTGTGGCCATTTAAAGTAATTGGCCGTCTCGATGACAAACCCATGATTGTTGTCAATTACAACGGAGAAGAAAAACAATTTGCTGCTGAGGAAATCTCATCCATGGTATTGAGAAAAATGCGTGAGATTGCAGAAGCTTACCTTGGATCAAAAGTGAAGGATGTTGTTATAACAGTTCCTGCTTATTTTGATAACTCACAACGTCAAGCTACTAGAGATGCAGGTGAAATTGCAGGCATGAATGTTAAGCAAATAATCAATGAGCCTACTGCAGCAGCAATTGCATATGGCCTTAACATGAAACCGTTTAAATTTAATCATCAATATAGAAATGTTTTCGTTTTTGATTTAGGTGGTGGTACATTGGATGTGTCTATTCTCACATTTGACACGGATGATATCCAAGTTAAGGCCATTGGTGGAGATACTCACCTCGGGGGACAAGACTTTGATAATACAATGGTGAAACATTTTGTGAAGGAATTCTTGAGGAAGCATAAAATTGACATTAGTGGAGACCCACGAGCCGTGAGGAGGTTGAAGTCTGCTTGTGAGAAAGCAAAGAGGACACTTTCTTCCAATACCAACGCCACCATTGAGATAGAATGTTTACAAAAAGATATAGACTTCCACTCAACAATTAGTCGTGCAAAGTTTGAGGAACTCAACGAATGTCATTTCGACAAGTGCATGGAGATTGTAGAAAAATGTTTCGCAGATAGTAGGATGGAGAAGAGTAGCATTCATGATGTTGTCCTTGTTGGTGGCTCTACTAGGATTGTAAAAGTGCAACAACTATTGAGTGACTTCTTTGAAGGGAAAAATTTATGCAAAAGCATAAATGCAGATGAGGCAGTTGCACATGGTGCTGCGGTCCAAGCTTCGATAATGAGTGGTGAGTTTAGTGAAAAGGTGCAAGATTTGCTATTCAAGGACGTTATTCCTTTGTCTCTTGGATTGGATACTCACGGGGGAATCATGGAAATAATAATTCCTAGGAATACCAAAATTCCTACGAACATGGAGCACGTCTTCACGACTCATTTTGACAACCAAACCAATATTCTAATTCATGTTTATGAGGGTGTGAGACAAACAACTAGAGACAACAACTTGCTAGGAAAATTTGTGTTGGAAATTCCTCCAGCTCCGGCAGGTCGTCCTCAAATCAAGGTCAGCTTCCAAATTGATGATGATGGCATCTTACACGTCTCTGCCTTGGAAAAATTGTCCGGGGTTAACATGAATGTTAAAATAATAAGTGACAATGGAAGACTTTCAAAGGAGGAAATTGAGAGGATGATCAAAGAAGCTGAGAAGTGCAAAGATGACGAAAAGAGGTATCAGAAGAAGGTAGACGCAAGAAATGCATTGGAGACTTATGCATCCAATATGAGGAAAGTGATAAATGATAAGGATATTGGATCAAATCTTTCCTCTAAAGACAAGAAAGAGATCAATAAAAAAATTGATTTGGTTTTATTGTGGCTTGAAGTTAATGATACTGCCGAAAAACATGATTTTGAGCATTTTCGTAGCATTCTTTCAAGTGTATTTGATCCGATTATTTTGAAGATGATGACGGATGAAAATGATGCACAAACCGGTACTGTTGTTGGTTATCCTGTTAAGAATAAAAAGAGTCGTTGGATATCATTATTAGCAAATTTTGCCTTTAATGTAGTATATTCAACTGCAACTGGTAACATCATTGGGTTAGTTTCTCCCATAATTGACATTGTGTTTAATAGTTAA 2028 0.3836 MAGTSKKVAIGIDLGTTYSCVAVWRNDQLEIIVNEQGNRITPSYVAFTDSQRMIGDPAFNKAAYNPTNTVFDAKRLIGRRFSDPIVQNDMKLWPFKVIGRLDDKPMIVVNYNGEEKQFAAEEISSMVLRKMREIAEAYLGSKVKDVVITVPAYFDNSQRQATRDAGEIAGMNVKQIINEPTAAAIAYGLNMKPFKFNHQYRNVFVFDLGGGTLDVSILTFDTDDIQVKAIGGDTHLGGQDFDNTMVKHFVKEFLRKHKIDISGDPRAVRRLKSACEKAKRTLSSNTNATIEIECLQKDIDFHSTISRAKFEELNECHFDKCMEIVEKCFADSRMEKSSIHDVVLVGGSTRIVKVQQLLSDFFEGKNLCKSINADEAVAHGAAVQASIMSGEFSEKVQDLLFKDVIPLSLGLDTHGGIMEIIIPRNTKIPTNMEHVFTTHFDNQTNILIHVYEGVRQTTRDNNLLGKFVLEIPPAPAGRPQIKVSFQIDDDGILHVSALEKLSGVNMNVKIISDNGRLSKEEIERMIKEAEKCKDDEKRYQKKVDARNALETYASNMRKVINDKDIGSNLSSKDKKEINKKIDLVLLWLEVNDTAEKHDFEHFRSILSSVFDPIILKMMTDENDAQTGTVVGYPVKNKKSRWISLLANFAFNVVYSTATGNIIGLVSPIIDIVFNS* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0001 675 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 546 IPR029047 -
Tpr2g0001 675 Gene3D - 71 126 - -
Tpr2g0001 675 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 621 IPR029048 -
Tpr2g0001 675 Pfam Hsp70 protein 9 617 IPR013126 GO:0005524|GO:0140662
Tpr2g0001 675 SUPERFAMILY Actin-like ATPase domain 201 387 IPR043129 -
Tpr2g0001 675 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Tpr2g0001 675 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 550 IPR029047 -
Tpr2g0001 675 SUPERFAMILY Actin-like ATPase domain 7 191 IPR043129 -
Tpr2g0001 675 Coils Coil 522 542 - -
Tpr2g0001 675 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tpr2g0001 675 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 3 625 - -
Tpr2g0001 675 PANTHER HEAT SHOCK PROTEIN 70KDA 3 625 IPR013126 GO:0005524|GO:0140662
Tpr2g0001 675 Gene3D Actin; Chain A, domain 4 237 320 - -
Tpr2g0001 675 Gene3D - 547 619 IPR029048 -
Tpr2g0001 675 Gene3D - 192 368 - -
Tpr2g0001 675 PRINTS 70kDa heat shock protein signature 8 21 - -
Tpr2g0001 675 PRINTS 70kDa heat shock protein signature 36 48 - -
Tpr2g0001 675 PRINTS 70kDa heat shock protein signature 58 66 - -
Tpr2g0001 675 PRINTS 70kDa heat shock protein signature 146 166 - -
Tpr2g0001 675 PRINTS 70kDa heat shock protein signature 211 221 - -
Tpr2g0001 675 PRINTS 70kDa heat shock protein signature 339 355 - -
Tpr2g0001 675 PRINTS 70kDa heat shock protein signature 371 391 - -
Tpr2g0001 675 PRINTS 70kDa heat shock protein signature 398 417 - -
Tpr2g0001 675 PRINTS 70kDa heat shock protein signature 478 494 - -
Tpr2g0001 675 Gene3D - 10 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0001 Tpr-Chr2 2105 5527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0001 1 617 Calmodulin-binding Proteins AT3G12580 64.563 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0001 K03283 - gmx:100798636 853.973