Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4515 ATGAGGTTCATGTCTTTGCTAATTAAATATCAATTATTAGCAATTATATTCACTATCATATCCCTTACAAAAGTTAGTTGCTTGAATTTCACTTTCTCAACCTTTCACCAAAACGATGCAAACAAATTGTTACTCAATTATTCATATATACAAAGTGAAGCCATACAAGTAACCGCAGAAAATAGTAAAGCTTCGATGTCGAATTTATCTGGACGTGCTTTATACAAGGATCCATTCAAAATTGCTTCATTCAACACCACTTTTGTTCTCAATATAACTCCTGACACTTCCCCTGGTGGAGAAGGCATAGCTTTTATCTTAGCCTCAGAACCAACTCGCCCTGAAAACAGTTCAGGACAATGGCTTGGTATTGTAAATGCTTCCACCAATGGAACTTCTCGAGCCGCAATTCTTGCAGTTGAGTTTGATACACGAAAGAGTTCAATTGAAGACGGACCTGACAACCATGTTGGAATCAATATAAACAGCATATCCTCCTTGAAACAAGCATCATTATCAAACACTAAGGTGAATCTTTCATCTGGTAAAGATGTAACTATAAGAATTGAATATTCTAATGATGTGATATTTGTTTTTGGTTCAATGAGTGGAAATTCACAAGTATCTATGGAGACCCTTTTGGTATCTCCACCTCTTAATCTCTCTTCCTATTTTAAACAAGAGGTTTATGTCGGTTTCTCTGCTTCAACAAGCAATTACACAGAGCTAAACTGTGTAAAAGCATGGGAATTCAATGGTGTAGATAATGGTGTAGATATTGGTAGTAACAAAAATTACTTGTGGATTTTTATTATTATTCCAATAGTATTATTGATTATAATCATAGGTGGATTAGTCTTTTTCTTCCTTTATTTTAAAAGGAAAAAAAACATGGAAATTGAAGAAGATACATATGGAGGGATAGAGGATCAAATTCAACACTCATCTATGGCTCCAAAGAAATATAAACTAAAGGAATTGATGATAGCAACAAGTGATTTCAGCCGTCGGAACAAACTTGGCGAAGGTGGATTTGGAACGGTTTATAAGGGTATTCTTGAAAACAACAAAGAGATAGCTGTGAAGAGAGTCTCGAAGAACTCGCGTCAAGGAAAGCAAGAATTTATGGCAGAAGTTACAACAATTGGAAGCCTACACCACAAAAACTTGGTGAAACTTATTGGTTGGTGCTACGAAAGCAAAGAGCTTCTCCTCGTTTACGAGTTCATGCCTAAAGGAAGCTTAGACAAATACCTATTTAACCAATCAAGTGAATTAGAATCACAATATTCTAAAGTACTTGATTGGAAAACTAGGAATAGCGTGATTCGTGATGTAGCACAAGCATTGGATTATCTTCATAATGGTTGTGAAAGAAGGGTACTTCATAGAGATATTAAAGCAAGCAATATAATGTTGGACTTAGATTACGTCGCTAAATTAGGTGATTTTGGATTAGCGCGTACAGTTCAAAAGAGAAATGAAACTCATCACTCGACAAAGGAAATTGCGGGGACCCCAGGTTATATGGCACCTGAAACTTTTCTAATAGGAAGAGCAACGGTCGAAACAGATGTGTATGCATTTGGTGTACTTGTTTTAGAAGTTGTGTGTGGGAGAAGACCGGGAAATGTGTTTGCACAAGACGATTATAAAAATAGTATAGTGTATCAAGTTTGGGAGCTTTATGGAAAAGGTGAAATTGTTAGTGTTGTGGATAAAAGGATAAGTTGTGAAGAGAAAGAGGTTGAGAGGGTAAAATGGGAAGAAGAAATTGAAATTGTGCTTGTTCTTGGTTTGGCATGTTGTCATCCAAATCCTAATGAAAGACCATCAATGAAAAGTGTTTTAATGGTTTTAAATGGAGAAGCATCTCCTCCAATTATTCCAATGGAAAGACCTTCTTTTGTTTGGCCAGCTATGCCTTCATCTTTCAAAGAAGGTGAAGATAATTCTCTTATCAATGGTCCATTCACTCAACTTAGTGGAAGATAG 1995 0.3599 MRFMSLLIKYQLLAIIFTIISLTKVSCLNFTFSTFHQNDANKLLLNYSYIQSEAIQVTAENSKASMSNLSGRALYKDPFKIASFNTTFVLNITPDTSPGGEGIAFILASEPTRPENSSGQWLGIVNASTNGTSRAAILAVEFDTRKSSIEDGPDNHVGININSISSLKQASLSNTKVNLSSGKDVTIRIEYSNDVIFVFGSMSGNSQVSMETLLVSPPLNLSSYFKQEVYVGFSASTSNYTELNCVKAWEFNGVDNGVDIGSNKNYLWIFIIIPIVLLIIIIGGLVFFFLYFKRKKNMEIEEDTYGGIEDQIQHSSMAPKKYKLKELMIATSDFSRRNKLGEGGFGTVYKGILENNKEIAVKRVSKNSRQGKQEFMAEVTTIGSLHHKNLVKLIGWCYESKELLLVYEFMPKGSLDKYLFNQSSELESQYSKVLDWKTRNSVIRDVAQALDYLHNGCERRVLHRDIKASNIMLDLDYVAKLGDFGLARTVQKRNETHHSTKEIAGTPGYMAPETFLIGRATVETDVYAFGVLVLEVVCGRRPGNVFAQDDYKNSIVYQVWELYGKGEIVSVVDKRISCEEKEVERVKWEEEIEIVLVLGLACCHPNPNERPSMKSVLMVLNGEASPPIIPMERPSFVWPAMPSSFKEGEDNSLINGPFTQLSGR* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4515 664 PANTHER - 11 656 - -
Tpr1g4515 664 Gene3D Transferase(Phosphotransferase) domain 1 410 626 - -
Tpr1g4515 664 ProSiteProfiles Protein kinase domain profile. 334 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g4515 664 Gene3D Phosphorylase Kinase; domain 1 308 409 - -
Tpr1g4515 664 Pfam Protein kinase domain 335 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g4515 664 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 252 IPR013320 -
Tpr1g4515 664 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 11 656 - -
Tpr1g4515 664 SMART serkin_6 334 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g4515 664 Pfam Legume lectin domain 28 254 IPR001220 GO:0030246
Tpr1g4515 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Tpr1g4515 664 Gene3D - 26 259 - -
Tpr1g4515 664 SUPERFAMILY Protein kinase-like (PK-like) 316 620 IPR011009 -
Tpr1g4515 664 CDD lectin_legume_LecRK_Arcelin_ConA 28 252 IPR001220 GO:0030246
Tpr1g4515 664 CDD STKc_IRAK 340 622 - -
Tpr1g4515 664 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4515 Tpr-Chr1 53395960 53398422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4515 28 632 Receptor kinase-like Gene Family AT4G02410 36.378 3.22e-119 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr1g4515 Pkinase 3.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4515 - - gmx:100790353 897.116