Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4495 ATGGACAAAAAAAACATTGAAAGAGAAACACATGACTTAATGAATGTTGAGTCATTCTCCCAACTTCCCTTCATCCGCCCTCCACCCACCATCAAAGAAAAAGGCATCCGTCTCTTCGGCATCGAATTCGGCGCCACCACGGAAGATAACAACGATGACTCCGAGTCGCCGGAAACAACTACCAACAACAACATTAACACATTTGAAGTTGAAAACAATAACAAAGACAACAACAATGAAAACAATAGAAGATTTGAATGTCATTATTGTTGTAGAAACTTCCCAACTTCACAAGCTTTAGGTGGTCATCAAAACGCACACAAAAGAGAACGTCAACATGCTAAACGACAACACCTTCAATCAACTATGGTACATGCTACTACTTTCTCTGATCCACATCTTTATCATCATCATCATCATCAACAACAACAACAACAACATCCTCTTTATAGATTCACATCATCATCACCATCATCATTATCATCATCCCCTTCTTATCCAACATGGAACACAAACTCATCTAATTCAGCTGGTGCAAGATTTTATAGCCATCCAACTTCTTACTCTCATCAACAACCTATTAATGGTAGTCCTTTAGCTTTTTGGCGTATTCCGAATAGCGCCGTTCAGAGTAACCCTAGTTTCAACCATGAACGCCCTCTACCTATGCTTGCTTCCAAGGAAAGAGCGAATTCGTCGCACGGTGCTCATGGAGTATCTTCTTCTTCTTCTGCTTCCCATAATCGCTATGTTTATGACTCTAAACGTAGCGACCATGTTAGTTTGGATCTTCATCTCTAA 801 0.402 MDKKNIERETHDLMNVESFSQLPFIRPPPTIKEKGIRLFGIEFGATTEDNNDDSESPETTTNNNINTFEVENNNKDNNNENNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRQHLQSTMVHATTFSDPHLYHHHHHQQQQQQHPLYRFTSSSPSSLSSSPSYPTWNTNSSNSAGARFYSHPTSYSHQQPINGSPLAFWRIPNSAVQSNPSFNHERPLPMLASKERANSSHGAHGVSSSSSASHNRYVYDSKRSDHVSLDLHL* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4495 266 MobiDBLite consensus disorder prediction 101 120 - -
Tpr1g4495 266 MobiDBLite consensus disorder prediction 228 252 - -
Tpr1g4495 266 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Tpr1g4495 266 MobiDBLite consensus disorder prediction 233 250 - -
Tpr1g4495 266 PANTHER ZINC FINGER PROTEIN GIS 1 266 - -
Tpr1g4495 266 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Tpr1g4495 266 MobiDBLite consensus disorder prediction 135 156 - -
Tpr1g4495 266 SUPERFAMILY beta-beta-alpha zinc fingers 81 113 IPR036236 -
Tpr1g4495 266 PANTHER ZINC FINGER PROTEIN GIS 1 266 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4495 Tpr-Chr1 52992659 52994006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4495 1 266 C2H2 Transcription Factor Family AT2G41940 39.344 1.44e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4495 - - jre:109011926 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4495 1 52992659 52994006 Tpr1g4495 1 52992659 52994006 ECH