Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g4451 | ATGGATCCAAAGCAGGAGGTTCAGGCTCAGTCCGTTGAGGCCGAGCCAAAAGCCAAAGTTAAGGAAATTCTTTCCGTTCAAGATGAAGAAGATGAGCTGATGAAGAAAAGGCACTTGAATGTTGTGTTTATTGGGCATGTTGATGCTGGCAAATCTACAACTGGAGGTCAGATACTTTTCCTCAGTGGGCAAGTTGATGATCGAACTATCCAAAAATATGAGAAAGAAGCTAAGGACAAAAGTCGAGAAAGCTGGTACATGGCCTATATTATGGACACAAATGAGGAGGAGAGAGTTAAGGGAAAGACTGTTGAAGTTGGAAGAGCACATTTTGAGACAGACACAACAAGGTTTACCATTTTGGATGCACCTGGCCACAAGAGCTATGTTCCTAATATGATCAGTGGTGCATCTCAAGCTGATATTGGAGTGTTGGTAATTTCTGCTCGGAAGGGAGAGTTTGAAACTGGATATGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTGACTAAGCTGCTTGTGGTTGTCAATAAAATGGATGATCCTACAGTAAACTGGTCAAAAGAAAGGTATGATGAAATTGAGTCAAAGATGATTCCATTTCTAAAGCAATCAGGATACAATGTAAAGAAAGATGTCTCATTTTTACCAATATCGGGGCTCATGGGTTTAAACATAAAAACTAGATTGGATAAAAGTCTTTGTTCATGGTGGGATGGACCTTGCTTATTTGAATCCCTTGATAGTATTGAAGTTCCTATGGGAGATCCCAAAAGTCCTTTCAGGATGCCTATAATTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGCAAAGTGGAATCTGGTACTATTAGGGATGGAGATTCCCTTTTGATCATGCCAAATAAGGATCATGTAAAAGTTGTTGCTATATATATCGATGAAAATCGGGTTACACTCGCTGGACCTGGTGAAAATTTACGGGTTCGATTATCTGGCGTTGAAGAAGAAGACATATTGTCTGGGTTCGTCCTGTCTAGTGCTGCAAATCCAATATCAACAGTTACTGAGTTTGTTGCTCAGTTGCAGATCCTTGAATTACTGGACAATGCTATTTTTACTGCTGGATACAAAGCTGTTCTGCATGTCCACTCTGTAGTTGAGGAATGTGAGATTGTTGAGCTATTGCAACAAATTGATCCAAAGACAAGGAAGCCTATAAAAAAGAAAGTTCTCTTTGTAAAGAATGGCGCTATTGTATTATGCCGTGTTCAGGTTAATAACGTGATATGTGTTGAGAAGTTCTCTGATTTTCCACAACTAGGGAGGTTCACTCTTCGCACTGAAGGAAAAACTGTTGCTGTGGGGAAAATCACTGCTCTCTGA | 1389 | 0.4032 | MDPKQEVQAQSVEAEPKAKVKEILSVQDEEDELMKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETDTTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVTKLLVVVNKMDDPTVNWSKERYDEIESKMIPFLKQSGYNVKKDVSFLPISGLMGLNIKTRLDKSLCSWWDGPCLFESLDSIEVPMGDPKSPFRMPIIDKFKDMGTVVMGKVESGTIRDGDSLLIMPNKDHVKVVAIYIDENRVTLAGPGENLRVRLSGVEEEDILSGFVLSSAANPISTVTEFVAQLQILELLDNAIFTAGYKAVLHVHSVVEECEIVELLQQIDPKTRKPIKKKVLFVKNGAIVLCRVQVNNVICVEKFSDFPQLGRFTLRTEGKTVAVGKITAL* | 463 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g4451 | 462 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 92 | 107 | IPR031157 | - | |
Tpr1g4451 | 462 | PRINTS | GTP-binding elongation factor signature | 40 | 53 | IPR000795 | GO:0003924|GO:0005525 | |
Tpr1g4451 | 462 | PRINTS | GTP-binding elongation factor signature | 119 | 129 | IPR000795 | GO:0003924|GO:0005525 | |
Tpr1g4451 | 462 | PRINTS | GTP-binding elongation factor signature | 135 | 146 | IPR000795 | GO:0003924|GO:0005525 | |
Tpr1g4451 | 462 | PRINTS | GTP-binding elongation factor signature | 179 | 188 | IPR000795 | GO:0003924|GO:0005525 | |
Tpr1g4451 | 462 | Gene3D | Translation factors | 265 | 350 | - | - | |
Tpr1g4451 | 462 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 356 | 461 | IPR009001 | - | |
Tpr1g4451 | 462 | CDD | eRF3_C_III | 354 | 462 | - | - | |
Tpr1g4451 | 462 | Gene3D | Translation factors | 354 | 462 | - | - | |
Tpr1g4451 | 462 | CDD | eRF3_II | 267 | 348 | - | - | |
Tpr1g4451 | 462 | Gene3D | - | 18 | 260 | IPR027417 | - | |
Tpr1g4451 | 462 | Pfam | Elongation factor Tu domain 2 | 280 | 346 | IPR004161 | GO:0005525 | |
Tpr1g4451 | 462 | PANTHER | TRANSLATION FACTOR | 28 | 456 | - | - | |
Tpr1g4451 | 462 | Pfam | Elongation factor Tu GTP binding domain | 36 | 238 | IPR000795 | GO:0003924|GO:0005525 | |
Tpr1g4451 | 462 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 27 | 271 | IPR027417 | - | |
Tpr1g4451 | 462 | Pfam | Elongation factor Tu C-terminal domain | 352 | 461 | IPR004160 | - | |
Tpr1g4451 | 462 | SUPERFAMILY | Translation proteins | 260 | 352 | IPR009000 | - | |
Tpr1g4451 | 462 | CDD | EF1_alpha | 40 | 260 | - | - | |
Tpr1g4451 | 462 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 36 | 265 | IPR000795 | GO:0003924|GO:0005525 | |
Tpr1g4451 | 462 | PANTHER | BNAA06G12300D PROTEIN | 28 | 456 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g4451 | Tpr-Chr1 | 52279360 | 52288521 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g4451 | 6 | 460 | Eukaryotic Initiation Factors Gene Family | AT5G10630 | 36.147 | 7.67e-97 | 303 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g4451 | K03267 | - | gmx:100793653 | 808.905 |