Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4415 ATGGCGAATCTCCCCCCTCAATCACCCTCTATGAAGAAAGATGAATCGAATTCCAGTGTATGTTCCTCCAGCACTGATTCCACCAGGATGATGTACGCAAAAAGTCTTGTAATTGAATTGAGCAATCCCGATCTACGAGAAAATGCTCTTACTGTGCTCTCCAAGATGACAGATTTATTTCAAGAACTCGCGCCAGTATTGTGGAATTCTTTTGGTATTATTGCAACATTTTTACAGGAAATAATTTCAATATATCCTGCAATTTCAACTCCAGATCTTACTCCACAACAATCAGCTCGAGTATGCAATGTACTTGCCCTACTTCAGTGTGTGGCATCCCACCCTGAGACAAAGATATCATTTCTGAAAGCTAACATTCCTATATATTTGTATCCCTATCTTCGCACAACAAACAATTCGGCACCGTATGAGGATTTGAGACTTGCTAGTCTTGGCGTCATTGCTGCAACAGTGAAGGTTAAGACCAGAGAAGCCATAGGTTTCCTTCTGGCAAGTGAAGTCATGCCGCTGTGCCTCCAAAGTATTGAAGTTGGCAAAGAACTGTCAAAAACAGTTGCAACATTTATTGTTGAGAAAATTCTGTCAGATCATGTTGGTATGGCTTATGTTTGTGTTATACCAGAACGCTATCATGCAGTAACCCGAGCTTTGGACATGTTGGCAAGTGCTCAGAATCAACCTTCATCGCGGCTTGTGAAGCTTTTGGTTTCGTGTTATAGTTATCTCTCGGAAAAACAAGTAATGTTTTTGCCGAAAACAATTCCACCACCATCTTAA 798 0.4098 MANLPPQSPSMKKDESNSSVCSSSTDSTRMMYAKSLVIELSNPDLRENALTVLSKMTDLFQELAPVLWNSFGIIATFLQEIISIYPAISTPDLTPQQSARVCNVLALLQCVASHPETKISFLKANIPIYLYPYLRTTNNSAPYEDLRLASLGVIAATVKVKTREAIGFLLASEVMPLCLQSIEVGKELSKTVATFIVEKILSDHVGMAYVCVIPERYHAVTRALDMLASAQNQPSSRLVKLLVSCYSYLSEKQVMFLPKTIPPPS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4415 265 Pfam Cell differentiation family, Rcd1-like 36 253 - -
Tpr1g4415 265 Gene3D - 25 261 IPR011989 -
Tpr1g4415 265 PANTHER UNCHARACTERIZED 6 253 - -
Tpr1g4415 265 SUPERFAMILY ARM repeat 37 201 IPR016024 -
Tpr1g4415 265 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4415 Tpr-Chr1 51809942 51814322 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Tpr1g4415 Rcd1 1.4e-84 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4415 K12606 - sind:105174887 282.722