Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4392 ATGGGAATTCCTCAAGCCATGGTTGCTCTTAAAGAAAGAGCAACGTTCGTGAAAGATTCGCTGCAGAGAAGCCAAACCATTACCGATAACATGGTTTCGATTCTTGGTTCGTTTGATCACCGTCTTTCTGCGCTCGAAACTGCAATGCGTCCCACTCAGATAAAAACGCATTCGATTCGAAGTGCACATGATAATATTGACAAGACTTTAAAAGCTGCGGAGGTGATTTTGACGCAATTTGATCAGACACGGAAGGCGGAGGCTAAAATACTGCGAGGGCCACATGAGGATCTAGAAAGCTATTTGGAAGCAGTTGATCAGCTTAGATCAAATGTTCGTTTCTTCAGCAGCAAAAAGAGTTTCAAAAGCAGTGAAGGTATCATCAACCATGCAAACAACTTGCTTGCTAAAGCTATCTTAAAGCTTGAAGATGAATTTAAACATCTTTTGACAAATTACAGCAAGCCTGTGGAACCTGATCGCCTTTTTGACTGCTTACCGAACTCTCTAAGGCCATCAGCTGCTGGAGGCGGCGGCGGTAAAAACCATTCAGAAAAACAAAGTGGAGAGGCTGTCACTTTCACTCTCCCAACTCTTATTCCCCCCAGAGTTTTACCATTGCTTCATGAATTAGCAATACAAATGGTTCAAGCGGGACATCAACAGCAGCTCTTTCGAGTCTATACAGACACTCGTTCTGCAGTCCTGGAGCAGAGTCTTAGGAAGTTAGGTGTAGAGAGGCTGAGTAAGGATGATGTTCAAAAAATGCAATGGGAGGTTTTGGAGGCTAAGATTGGAAACTGGATTCATTACATGAGGATTTCTGTAAAATTGTTGATTGTCGGGGAAAAAAAAATCTGTGATCAAATCTTTGAAGGTGTCGATTCTGTGAAAACTCAATGCTTTGCTGAAGTCACTGGTAGCAGTGTAGCTATGCTTCTTAGTTTTGGAGAGGCTATTGCCAGAAGCAAGAGGTCACCTGAAAAATTATTTGTTCTTCTCGATATGTATGAGATAATGAGAGAACTTCAACCAGAGATTGAGTCACTGTTTGATAGTAAAGTTTGCACTGAAATGCGGGAAGCTGCAATCAGTTTGACAAAGCGACTTGCTCAGACAGCCCAAGAAACCTTTGGTGACTTTGAGGAAGCAGTTGAAAAAGATGCTACTAAAACTGCTGTGCAAGATGGAACTGTCCACCCTCTAACCAGCTATGTCATCAATTACGTGAAATTTCTCTATGATTACCAAGCAACTCTGAAACAACTTTTTCAAGAGTTTGATCCTGGCGACCCAGAATCTCAGTTAGCATCTGTTACAACAAGGATTATGCAGGCTCTCCAGAATAACCTAGATGGAAAATCTAAACTATATAAAGACCCAGGACTAACCCAGTTATTTCTTATGAACAATATCCATTACATAGTGAGATCTGTGAGAAGGTCAGAGGCAAAGGACATGTTGGGGGATGACTGGGTACAAATACACCGAAGAATTGTGCAACAGCATGCAAACCAGTATAAAAGGATCTCTTGGGCAAAGATCTTGCAGTGCCTCACTGTCCAAGGAACTAATTCATCTGGTGGAGACAGCGGTGGACTTTCAAGAACAGCAGTTAAAGATAGGTTCAAGACATTTAACACTCAATTTGAGGAGCTTCATCAGAGACAATCTCAGTGGACTGTCCCAGATAGTGAGTTGCGCGAATCACTTAGACTGGCTGTTGCTGAAGTTTTGTTGCCTGCCTATAGATCTTTCCTTAAACGTTTTGGGCCCATGATTGAGAATGGAAAAAATCCTACAAAGTATATCAGATACTCTCCCGAGAATCTTGAACAAATGCTCGGTGAATTTTTCGAAAGCAAGGCGTGGAGCGAACAGAAGCGGTGA 1890 0.4217 MGIPQAMVALKERATFVKDSLQRSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEVILTQFDQTRKAEAKILRGPHEDLESYLEAVDQLRSNVRFFSSKKSFKSSEGIINHANNLLAKAILKLEDEFKHLLTNYSKPVEPDRLFDCLPNSLRPSAAGGGGGKNHSEKQSGEAVTFTLPTLIPPRVLPLLHELAIQMVQAGHQQQLFRVYTDTRSAVLEQSLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHYMRISVKLLIVGEKKICDQIFEGVDSVKTQCFAEVTGSSVAMLLSFGEAIARSKRSPEKLFVLLDMYEIMRELQPEIESLFDSKVCTEMREAAISLTKRLAQTAQETFGDFEEAVEKDATKTAVQDGTVHPLTSYVINYVKFLYDYQATLKQLFQEFDPGDPESQLASVTTRIMQALQNNLDGKSKLYKDPGLTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQGTNSSGGDSGGLSRTAVKDRFKTFNTQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPMIENGKNPTKYIRYSPENLEQMLGEFFESKAWSEQKR* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4392 629 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 625 - -
Tpr1g4392 629 Gene3D Exocyst complex component Exo70 74 629 - -
Tpr1g4392 629 Pfam Exo70 exocyst complex subunit 267 616 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr1g4392 629 SUPERFAMILY Cullin repeat-like 76 620 IPR016159 -
Tpr1g4392 629 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 625 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4392 Tpr-Chr1 51397190 51403869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4392 1 629 EXO70 exocyst subunit family AT5G52340 79.081 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4392 K07195 - gmx:100779774 1065.45