Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4390 ATGGCGGAAGTGCAACCCCGTAACCGCGGTAGAAGTTGTTGTTGTTGCCTCTTTGGTGTAATTTGGAAGGTCGTCGTAGCATTAATCGTCCTCATAGTTCTCGCAATTCTCATTATCTTCTTCATTGTTCAACCCCGTTCCTTCAAATTTAGTGTCAAAGAAGCCAAACTAACCGAATTCAACTACACCAATAACACCCTTCGTTACAACCTCATGCTCAATTTCACGGCCCATAACCCAAACAAAAAACTCACCATATACTACGATAAAATGGAGGGACACGTGTCCTATGAAGGAACTAGGTTCACTTCAACGAATGTTATGACAATGGGGTTTAATTCCTTTCGTCAAGACACTAAAAAAACGAATCGTATTAATGGTGTTTTCTCTGGACAACGTGTTGTGGTTTTCGATCATGATCAGATTTCTAACATTGAACGTGATAAGAAAGATGGAGTTTTTCATATCGATGTGAAGTTGTACTATAGCGTCAGGTTTAAGGTTTGGGATTTTGTTGATGAAGATGATTTTAAGGGTAACATTAAATGTGGTCTTGATGTTCCTTTTGGTTCTAATAATGGGACTAAGTTTATGAATGCATTTGAACCCACCAAATGCCATGTTAATTTTTGA 633 0.3839 MAEVQPRNRGRSCCCCLFGVIWKVVVALIVLIVLAILIIFFIVQPRSFKFSVKEAKLTEFNYTNNTLRYNLMLNFTAHNPNKKLTIYYDKMEGHVSYEGTRFTSTNVMTMGFNSFRQDTKKTNRINGVFSGQRVVVFDHDQISNIERDKKDGVFHIDVKLYYSVRFKVWDFVDEDDFKGNIKCGLDVPFGSNNGTKFMNAFEPTKCHVNF* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4390 210 PANTHER PROTEIN, PUTATIVE-RELATED 7 208 - -
Tpr1g4390 210 Pfam Late embryogenesis abundant protein 75 169 IPR004864 -
Tpr1g4390 210 PANTHER OS05G0367900 PROTEIN 7 208 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4390 Tpr-Chr1 51297811 51298792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4390 42 195 SNARE and Associated Proteins AT1G32270 32.484 3.14e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4390 - - gmx:100788062 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0677 6 5602445 5611943 Tpr1g4390 1 51297811 51298792 PCT