Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4389 ATGGCGGAAGCGCAACCCCATAACTGTTGTAGAAGATGCTGTTGTTGCCTCTTTGGCGTAATTTGGAAGCTCATCGTAGCAATAATCGTCCTCATAGGTCTCGCACTCCTCATTTTCTTCTTCATTGTTCAACCCCGCTCCTTCAAATTTAGTGTCAAAGAAGCCAAGCTAACTGAATTTAACTACCACAACTACACCCTCAGTTACAACCTCGTGCTCAATTTCACGGCCCATAACCCAAACAAAAAACTTGGCATCATCTACGATAAAGTGGAGGGATATGTGTCCTATGAAGGAATTAAGTTCCCTTCAACGGATGTTATAACATATTTGAATTCCTTCCGTCAAGACACTAAAAAAACGAATAGTATGAGTGGTGTTTTCTCTGGACAACGTGTTGTGGTTTTTGATCATGATCAGGTTTCTAACATTGAGCGTGATAAGAAAGTTGGAGTTTTTCATATTGATGTGAAGTTGTACTTTAGGATCAGGTTTAAGCTTGGTGATATTACTGGAGATGATGATACAAAGGGTAACATTAAATGTGGTCTTGATGTTCCTTTTGGTTCTAATAATGGGACTAAGGTCATGGATGCATTTGAACCCACCACATGTGTTGTTAATTTGTGA 630 0.3952 MAEAQPHNCCRRCCCCLFGVIWKLIVAIIVLIGLALLIFFFIVQPRSFKFSVKEAKLTEFNYHNYTLSYNLVLNFTAHNPNKKLGIIYDKVEGYVSYEGIKFPSTDVITYLNSFRQDTKKTNSMSGVFSGQRVVVFDHDQVSNIERDKKVGVFHIDVKLYFRIRFKLGDITGDDDTKGNIKCGLDVPFGSNNGTKVMDAFEPTTCVVNL* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4389 209 PANTHER OS05G0367900 PROTEIN 8 206 IPR044839 GO:0098542
Tpr1g4389 209 PANTHER PROTEIN, PUTATIVE-RELATED 8 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4389 Tpr-Chr1 51290831 51291705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4389 42 194 SNARE and Associated Proteins AT1G32270 32.911 8.42e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4389 - - gmx:100795302 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0679 6 5618852 5619808 Tpr1g4389 1 51290831 51291705 PCT