Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4388 ATGGCCGGTAACCAACTCAACGGCGCTTACTACGGTCCATCGATTCCACCGCCACAGCAAAAACCCCGCCGCCACCGCAACGACGACGGTTGCGGCTTCTGCAGCTGTCTCTGCGGCTGTTTCAGAGGCTGTTGCGGTTGCATCTTCAACTGCATCTTAAGCATAATCTGCAAAATCCTCACCACAATCATCATCATCATCGTAATCCTCGGTTTCCTCTTCTGGCTAATCGTTCGACCTAACGTCGTCAATTTCACTGTCACAGATGCATCTCTTACTCAATTCAATTTCACAAACAACAACACACTTCACTACGATCTTGCCGTTAACATCACGATCCGAAACCCTAATCGGAGAGTTGGTATCTATTACGATAACATCGAAACGCTTGCGTTTTATAAAGATGTTAGGTTTGGTTCTCAAACTTTAGGTCAATTCTTTCAGCATCATAAGAATACGAGTTTCTTGAACCCTAATTTTAAAGGTCAACAAGTTGTTCCTTTGAGTTCAAAACAGCTTTCGGAGTTTGAGAAAGAAAAGAATGATGGTGTTTTTGATATTAATGTGAAGCTTTTGCTTAATGTGAGGTTTAAATTGGGTTTGTTTAAGAGTGGGAAAGCTAAACCTAAGGTTCATTGTGATTTGAAGATTCCTCTGAAATCAAGCAATGGAACATTGGTGGGTAATGGGTTTCAAGCTACTGATTGTGATTGGGATTATAAGTGGAAATTGTTCCATTAA 741 0.4143 MAGNQLNGAYYGPSIPPPQQKPRRHRNDDGCGFCSCLCGCFRGCCGCIFNCILSIICKILTTIIIIIVILGFLFWLIVRPNVVNFTVTDASLTQFNFTNNNTLHYDLAVNITIRNPNRRVGIYYDNIETLAFYKDVRFGSQTLGQFFQHHKNTSFLNPNFKGQQVVPLSSKQLSEFEKEKNDGVFDINVKLLLNVRFKLGLFKSGKAKPKVHCDLKIPLKSSNGTLVGNGFQATDCDWDYKWKLFH* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4388 246 PANTHER OS05G0367900 PROTEIN 20 240 IPR044839 GO:0098542
Tpr1g4388 246 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 20 240 - -
Tpr1g4388 246 Pfam Late embryogenesis abundant protein 110 211 IPR004864 -
Tpr1g4388 246 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4388 Tpr-Chr1 51273596 51274784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4388 77 225 SNARE and Associated Proteins AT1G32270 40.397 3.21e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4388 - - aprc:113873272 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0680 6 5622244 5623340 Tpr1g4388 1 51273596 51274784 PCT