Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4377 ATGTCCACTTCCAAAAAAAACCTAACCTTAAACACTGTCTCCATAAATCTTGGTTGTGGAACATGTACAAGACCAAAACTTAGTCTAATTTTCAACCCAAAACCAAAACACAAAACTCTTCATCTTCATAAAAACTCTTCATCTTCCTCCACCCTTTGGAGAGAGAAAAACAGAGACATTATTGAAACTTCAACTAGCACATGTAACACTACACCAACAACAAACACCTCATTCGACTCCGAGAAATCGTCGTTGAAAGGATTTGGAAGAGTTGGAAATGAAGGTGTTGCTGTTGAGAAAGATTCTGATGATCCTTATCTTGATTTTAGACATTCAATGTTACAAATGATTTTGGAGAATGAGATATATTCTAAGGATGATCTTAGAGAGCTTTTGAACTGTTTTCTTCAGCTGAATTCGAAGGAACATCATGGGATTATTATCAGAGCTTTTACTGAGATCTGGAATGGTGTTTTTTCTGTTAAGTCTGGTTTTTCAGCTGGGTTTCATCTCAACCATATGTCACGTGACTTCTAG 537 0.3631 MSTSKKNLTLNTVSINLGCGTCTRPKLSLIFNPKPKHKTLHLHKNSSSSSTLWREKNRDIIETSTSTCNTTPTTNTSFDSEKSSLKGFGRVGNEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSKEHHGIIIRAFTEIWNGVFSVKSGFSAGFHLNHMSRDF* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4377 178 Pfam Transcriptional repressor, ovate 102 158 IPR006458 -
Tpr1g4377 178 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 163 IPR038933 GO:0045892
Tpr1g4377 178 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 96 156 IPR006458 -
Tpr1g4377 178 ProSiteProfiles OVATE domain profile. 98 157 IPR006458 -
Tpr1g4377 178 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4377 Tpr-Chr1 51050889 51051842 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tpr1g4377 Ovate 1.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4377 - - pvu:PHAVU_007G269800g 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4377 1 51050889 51051842 Tpr1g4377 1 51050889 51051842 ECH