Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4316 ATGGACTCACACAATCAACTTTTCATCCTCTTATGTGTTTCCCTTTTACTTCTCTCAGGACAAATGGGGTTGCAAGTTGAGGCCGGTCGCCACCATCTCCATCATCCTTCAAGAGAATTGTTCATTTTTGGAGACTCGTATGTTGATACTGGCAACACCCCCAAAAGTCAAGCTGGTTCGTGGAAACAACCTTACGGCATAACTTTTCCCCAAAAACCGGCCGGAAGATTCTCCGATGGGAGAGTTTTATCTGACTTCATTGGTGTATTTGATACATCTACTTCTGGCCCAAATATGACCGCTCAAATTGATTCCTTCAACCAGCTCATTCAAGAAAATGTTTACACTCCCTCAGATCTCTCCAAATCTATTGCTTATGTCTCTGTTTCTGGAAATGACTACAATTTTTACTTGGCCACAAATGGCTCTCTCCCGGGTTTCCCATCATTCATTGCCTCAGTAGTTAAACAAACCACTGCCGATTTGATTCATCTCCAAAGCATAGGATTTAAGAGAATTGTTGTAGGTGCATTACAACCCCTCGGTTGTCTTCCTCTAGCCACTGCTCAAACATCATTCCAAAGTTGCAATAGTACATTTAATGACCTAGTAACACTCCACAACAATCTATTGAACCAATCTGTGACAAAGTTGAACCAAGAAAGCAATGATCACAACACATTCACAATTCTAGACCTCTTCGACGGTTTTCGGACAGTGTTGAATAACCCTTCAAGCCATAACATCAAGGAACGTTTGAAGCCATGTTGCTTCGGAGTAAGCAGTGAGTATAATTGTGGAAGTGTAGATGAGAATAATGTTAAGAAATATTTGGTTTGTGAAAATCCTGAATCAACATTCTTTTGGGATCGGTTGCACCCAACACAAGCGGGTTGGAATGCTGTGTATAGTGAGTTGGAGAAGAAAGGTGTTTACAAAATATTGTACTAG 951 0.4101 MDSHNQLFILLCVSLLLLSGQMGLQVEAGRHHLHHPSRELFIFGDSYVDTGNTPKSQAGSWKQPYGITFPQKPAGRFSDGRVLSDFIGVFDTSTSGPNMTAQIDSFNQLIQENVYTPSDLSKSIAYVSVSGNDYNFYLATNGSLPGFPSFIASVVKQTTADLIHLQSIGFKRIVVGALQPLGCLPLATAQTSFQSCNSTFNDLVTLHNNLLNQSVTKLNQESNDHNTFTILDLFDGFRTVLNNPSSHNIKERLKPCCFGVSSEYNCGSVDENNVKKYLVCENPESTFFWDRLHPTQAGWNAVYSELEKKGVYKILY* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4316 316 Pfam GDSL-like Lipase/Acylhydrolase 40 304 IPR001087 GO:0016788
Tpr1g4316 316 Gene3D SGNH hydrolase 30 309 IPR036514 -
Tpr1g4316 316 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 88 308 - -
Tpr1g4316 316 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 87 - -
Tpr1g4316 316 PANTHER OSJNBB0059K02.9 PROTEIN 1 87 - -
Tpr1g4316 316 PANTHER OSJNBB0059K02.9 PROTEIN 88 308 - -
Tpr1g4316 316 SUPERFAMILY SGNH hydrolase 38 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4316 Tpr-Chr1 50261413 50267123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4316 40 297 Acyl Lipid Metabolism Gene Families AT4G10950 25.938 1.92e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4316 - - gmx:100789208 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4316 1 50261413 50267123 Tpr1g4316 1 50261413 50267123 ECH
Tpr6g0756 6 6270523 6274870 Tpr1g4316 1 50261413 50267123 PCT