Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4315 ATGGATCAACTTTATCCTATAGCTACTAATGCTTCTCTAGTTTTTTCACTCATCACTTTGATCATCGCCTTAATATTAATAATTTTTTTTAGTACAACTTTTTCATCTCTCACATGTTTTCACAAATTTATGAGTAGTAGTGTCTTTTGTAATTGTGAAATTTGCCAAGCTTATCTCACTTCAAGTTGGTCAAAAGATTTCAACAATCTTTGTGATTGGTATACTCATCTCCTAAAAAAATCACCAACAAAAACCATTCATATACACGTCCTACAAAACATAATCACCGCAAATCATGAAAACGTTGAGTACATACTCAAAACAAAATTCGAAAACTACCCAAAAGGAAAACCCTTTTCAACAATCCTAGGTGATTTTCTTGGTCGTGGTATTTTCAACGTGGATGGCGATTTATGGAAATTTCAAAAGAAGATGGTAAGTTTAGAGCTCAATAAACACTCCATAAGATCTTTTGCCTTTGAAGTTGTAAACAATGAAATCCAACTTCGTCTCATCCCTCTACTTCAAATCCAAAGCGAAGTCGCTTTGGATTTACAAGACGTTTTCAAAAGATTTTCTTTTGATAGTATTTGTAGATTTTCTTTTGGTTTAGACCCTAAGTGTTTAGAAAAATCCTTACCCATGTCAGATTTCGCTATTTCATTCGATTTAGCATCAAAATTATCCGCGGAAAGAGCTATGGTTGTGTCACCAATAATTTGGAAGATCAAAAGATTTTTCAACATGGGTAGTGAAAAAGAGCTCAAAAAAAGTATAACCATGATTAATATGTTAGCCAAAGTTGTTATAAAGCAAAAAAGAAAAATGGGATTACAAGATCACAAAGATTTGTTATCAAGATTCATGAGTACTACAATTCATGATGACATGTTTCTTAGAGACATAGTCATAAGTTTCTTATTGGCCGGTCGCGACACCGTCGCATCATCACTCACAAGTTTCTTTTGGCTGTTAGCGAAAAATCCGGAAGTTGAGTCAGAAATTTTGTTAGAGGCAGAAAGAGTAATTGGACCATATGATAAAAATAATAATAATAACTTAGGTGTGACAAATTTTGAACAACTTAGTAAATTGCATTATTTACATGCAGCAGCACATGAAAGTATGAGACTTTATCCACCAATCCAATTTGATTCAAAGTTTTGTTTGGTGGATGATGTTTTAATGGATGGTACAAAAGTGAAGAATGGTACTAGGGTTACATATCATCCATATGCAATGGGTAGGTTAGAGGAATTGTGGGGTCAAGATTGTTTAGAGTTTAAGCCACAAAGGTGGTTGAAAGATGGTATTTTTCAACCTCAAAATCAATTCAAGTACCCTATTTTTCAAGCTGGATTAAGGGTTTGTATTGGTAAAGAAATGGCTTTAATGGAACTTAAAAGTGTGGCAATTTGTTTACTTAGAAAGTTTCATATTGAATTGGCAGATACTCCAATGTTTCATGGTAATCATCCGAGATTCTCTCCTGGACTCACTGCCACTTTTGCTTTTGGTCTTCCTGTGTTTGTTCATGAAAGAGGAACCAATTAA 1554 0.3378 MDQLYPIATNASLVFSLITLIIALILIIFFSTTFSSLTCFHKFMSSSVFCNCEICQAYLTSSWSKDFNNLCDWYTHLLKKSPTKTIHIHVLQNIITANHENVEYILKTKFENYPKGKPFSTILGDFLGRGIFNVDGDLWKFQKKMVSLELNKHSIRSFAFEVVNNEIQLRLIPLLQIQSEVALDLQDVFKRFSFDSICRFSFGLDPKCLEKSLPMSDFAISFDLASKLSAERAMVVSPIIWKIKRFFNMGSEKELKKSITMINMLAKVVIKQKRKMGLQDHKDLLSRFMSTTIHDDMFLRDIVISFLLAGRDTVASSLTSFFWLLAKNPEVESEILLEAERVIGPYDKNNNNNLGVTNFEQLSKLHYLHAAAHESMRLYPPIQFDSKFCLVDDVLMDGTKVKNGTRVTYHPYAMGRLEELWGQDCLEFKPQRWLKDGIFQPQNQFKYPIFQAGLRVCIGKEMALMELKSVAICLLRKFHIELADTPMFHGNHPRFSPGLTATFAFGLPVFVHERGTN* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4315 517 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4315 517 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4315 517 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4315 517 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4315 517 Pfam Cytochrome P450 82 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4315 517 SUPERFAMILY Cytochrome P450 68 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4315 517 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4315 517 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4315 517 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4315 517 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4315 517 PANTHER CYTOCHROME P450 37 509 - -
Tpr1g4315 517 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 37 509 - -
Tpr1g4315 517 Gene3D Cytochrome P450 57 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4315 Tpr-Chr1 50247182 50248980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4315 43 514 Cytochrome P450 AT2G27690 57.442 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4315 K20624 - gmx:102662117 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4315 1 50247182 50248980 Tpr1g4315 1 50247182 50248980 ECH