Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4311 ATGGCGGTTCCTGGTAGGCGCAATGGTCTGAACGATGACGATGATGAAGAATCCAACGGTCTTTTCGAAGAAGAAGTTCTCGTTGAAGAATCTGACACTCCTCCTCATCTTCGTGACCTCTCCCATGCCGCTCAAAACGGCGACCTCAACGCCCTCCGCCTCGCAATCGATAATTTGAGTGGTAGTATTGATGAACCGGTGGAGGATGGCGATACGGCTCTTCATTTGACCTGTTTATATGGCCATTTTCAATGCGCACAGCTGCTACTAGAAAGAGGAGCTGACTTGGAGGCTAAGGATGAAGATGGGGCAATTCCTTTGCACGATGCATGTGCGGGAGGATTTTTGGAGATAGTCCAACTTCTATTTAACAGAGCTAGTGACTCTGAGCATATCAAAAGGATGCTAGAATCAGTTGATTCCGAGGGTGATACTCCTCTTCATCATGCTGCAAGAGGTGAGCATGCTGATGTAATTAGGTTGTTGCTGTCTAATGGCGCGTCAACCACAAAGGAAAACTTATATGGGAAGACCCCTGCAGAGTTACCTGAACACATGACAGAAGCTAGGAGGTTGCTTGAAGCTGCTGCTGCTGCCATGGCAATCTAA 609 0.4778 MAVPGRRNGLNDDDDEESNGLFEEEVLVEESDTPPHLRDLSHAAQNGDLNALRLAIDNLSGSIDEPVEDGDTALHLTCLYGHFQCAQLLLERGADLEAKDEDGAIPLHDACAGGFLEIVQLLFNRASDSEHIKRMLESVDSEGDTPLHHAARGEHADVIRLLLSNGASTTKENLYGKTPAELPEHMTEARRLLEAAAAAMAI* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4311 202 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Tpr1g4311 202 SUPERFAMILY Ankyrin repeat 40 182 IPR036770 -
Tpr1g4311 202 Gene3D - 34 201 IPR036770 -
Tpr1g4311 202 ProSiteProfiles Ankyrin repeat profile. 142 174 IPR002110 GO:0005515
Tpr1g4311 202 ProSiteProfiles Ankyrin repeat region circular profile. 102 128 - -
Tpr1g4311 202 Pfam Ankyrin repeats (3 copies) 102 171 IPR002110 GO:0005515
Tpr1g4311 202 Pfam Ankyrin repeats (3 copies) 40 100 IPR002110 GO:0005515
Tpr1g4311 202 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Tpr1g4311 202 ProSiteProfiles Ankyrin repeat profile. 102 134 IPR002110 GO:0005515
Tpr1g4311 202 ProSiteProfiles Ankyrin repeat region circular profile. 142 173 - -
Tpr1g4311 202 SMART ANK_2a 35 65 IPR002110 GO:0005515
Tpr1g4311 202 SMART ANK_2a 142 171 IPR002110 GO:0005515
Tpr1g4311 202 SMART ANK_2a 69 98 IPR002110 GO:0005515
Tpr1g4311 202 SMART ANK_2a 102 131 IPR002110 GO:0005515
Tpr1g4311 202 PANTHER TANKYRASE-LIKE 1 197 - -
Tpr1g4311 202 PANTHER SOWAH (DROSOPHILA) HOMOLOG 1 197 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4311 10 185 Ion Channels AT2G25600 30.542 1.95e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4311 - - gmx:100527544 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4311 1 50187216 50189055 Tpr1g4311 1 50187216 50189055 ECH