Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4287 ATGGAATCTTTTATTGTTTCAGACCAATTGTTGCCATCATTTTGGTGTCTCATACTCGTTTTTCTTGTTTCTACACTCCTCATCAAACATCAAAGTTGCAACCAAAAATCTGAAAAACCCAAACTCCCTCCTGGTCCCACACCTTGGCCTATAGTAGGCAACCTCCCTGAAATGCTTGCAAATAGGCCAACATTTAGATGGATACAAAAAATGATGAATGACATGAACACGCAAATTGCGTGCATCCGTTTAGGTAATGTTCATGTCATTACAGTGACTGATCCTGAAATTGCACGTGAAATATGTATAAAACAAGATGCAATTTTTGCTTCAAGACCGAGTAGTTGGTCCAATGAATATGTTACTACTGGATATCTGACCACTGCACTCACTCCCTTTGGAGAACAATGGAAGAAAATTAAGAAATTAATTAGCAATGAATTAGTTTCCCCTCTTAGACACCAATGGCTTCATGATAAAAGGGTGGAAGAGGCCGATAACATTGTACGGTATGTCTACAACCAATGTACGAAAATTGGTGGTGATGGAATTGTGAATGTGAGTGTTACTGCAAAACATTATACAGGGAATGTTATTAGGAGGTTGCTTTTGAATACCAGGTATTTTGGAAATGGTAGCGAAGATTTTGGACCGAGCTTTAAGGAAGTAGAATATGTTGAAGCGGTTTTTACTGTTTTGCAATACCTTTTTGCTTTCTCTGTTTCTGATTTCATGCCATGTCTGAGGGGTCTAGACTTGGATGGTCATGAGAAGAATATTAAGAAGGCTTGTAAGATCATGAAGAAATATCATGACCCTATAATTGAGGATAGAATTCGGCAATGGAAGAATGGGAAAAAGACGCATAAAGAAGATTTGCTTGATGTTCTCATTTCACTAAAAGATGCTCACAACAACGACCTTTTGACAGAGCAGGAGATTAAGTCTAATGTTTTGGAATTGACACTTGCAGCTGTTGATAATCCATCAAATGCACTTGAATGGGGACTTGCTGAAATGATTAATCAGCCTGAGCTACTTAAAAAGGCTACCGAAGAATTAGACAGTGTTGTTGGAAAAGAAAGGCTGGTGCAAGAATATGATTTTCCCAAACTCAACTATGTGAAAGCTTGTGCAAGAGAAGCTTTTCGCCGCCATCCAATTTGTGATTTCAACCTTCCCCACGTCGCGATGAAAGACACAGTTGTTGCTAATTACTTTATCCCAAAAGGTAGCCATGTCTATTTAAGGAGACAAGGACTTGGCCTAAATCCTAAAGTATGGAAAGAACCACTGAAGTTCAAGCCAGAACGGCATCTTAAGATAGATGGGTATAATGTGAGTTTGACAGATCCGAGTTTGGAATTGGTAACATTTGGTACCGGAAGGCGTGGGTGTTCAGGCATCATGCTTGGATCTTCAATGACTATTATGTTATTTGCAAGGTTGCTCCATGGATTCACTTGGAGTGCACCACCCAACTGTTCTAGCATTGATCTCTCTGAATCTCATGGAGGTACCACAAAAGCTAAGCCACTTGTGGCAGTGGCAAAGCCAAGATTACCAATAGAGACTTATCGATTATATTAA 1590 0.3943 MESFIVSDQLLPSFWCLILVFLVSTLLIKHQSCNQKSEKPKLPPGPTPWPIVGNLPEMLANRPTFRWIQKMMNDMNTQIACIRLGNVHVITVTDPEIAREICIKQDAIFASRPSSWSNEYVTTGYLTTALTPFGEQWKKIKKLISNELVSPLRHQWLHDKRVEEADNIVRYVYNQCTKIGGDGIVNVSVTAKHYTGNVIRRLLLNTRYFGNGSEDFGPSFKEVEYVEAVFTVLQYLFAFSVSDFMPCLRGLDLDGHEKNIKKACKIMKKYHDPIIEDRIRQWKNGKKTHKEDLLDVLISLKDAHNNDLLTEQEIKSNVLELTLAAVDNPSNALEWGLAEMINQPELLKKATEELDSVVGKERLVQEYDFPKLNYVKACAREAFRRHPICDFNLPHVAMKDTVVANYFIPKGSHVYLRRQGLGLNPKVWKEPLKFKPERHLKIDGYNVSLTDPSLELVTFGTGRRGCSGIMLGSSMTIMLFARLLHGFTWSAPPNCSSIDLSESHGGTTKAKPLVAVAKPRLPIETYRLY* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4287 529 Gene3D Cytochrome P450 27 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4287 529 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 525 - -
Tpr1g4287 529 SUPERFAMILY Cytochrome P450 43 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4287 529 Pfam Cytochrome P450 43 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4287 529 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 8 525 - -
Tpr1g4287 529 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4287 529 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4287 529 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4287 529 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4287 529 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4287 529 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4287 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g4287 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4287 Tpr-Chr1 49880362 49882115 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4287 10 526 Cytochrome P450 AT4G39950 52.703 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4287 - K12153 gmx:100809902 671.774