Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4249 ATGGAACTTTCTCTTCTCAGCCATCAGCTCCATCCTTTGCTCCTTCATTGCCCTCTCACCACCAATTTCTTGACAAGAACACAAAAAAGAATTTACAACAAAACTTCAAATAAGTTATTACAATGCAGCTGTTCACAGTCTTCTTCCAATAATACTTCTGTAGAACCAATCAATGTGTCTTTACAGATTGAAGGAAGGAGAACATTACTGACTTGTCTCCTTACCACATTTGCTGGAGTTTATGCATGTGATGTGGCTGAAGCTGTTAGCACTAGTAGAAGAGCTTTAAGAGGAGCCAAAATTCCTGAAAGTGATTACAAAACCTTGCCTAATGGTCTGAAGTACTATGATTTGAAGGTTGGGGATGGAGCTGAAGCTGTGAAAGGATCGCGTGTCGCAATTCACTATGTTGCTAAATGGAGGGGCATCACCTTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCGTATGGATTTGATGTAGGCGAATCTAAGAGAGGGAATGTCCTAAAAGGTTTGGATTTAGGAGTCGAGGGCATGCGAGTTGGAGGCCAGCGACTGTTACTTGTTCCTCCTGAACTTGCCTATGGAAGCAAGGGAGTCCAAGAAATCCCTCCAAATGCAACAATAGAGATGGATGTTGAACTGCTTGCTATCAAACAAAGTCCATTCGGGACTGCCGTAAAGATTGTTGAAGGCTAA 711 0.429 MELSLLSHQLHPLLLHCPLTTNFLTRTQKRIYNKTSNKLLQCSCSQSSSNNTSVEPINVSLQIEGRRTLLTCLLTTFAGVYACDVAEAVSTSRRALRGAKIPESDYKTLPNGLKYYDLKVGDGAEAVKGSRVAIHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGESKRGNVLKGLDLGVEGMRVGGQRLLLVPPELAYGSKGVQEIPPNATIEMDVELLAIKQSPFGTAVKIVEG* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4249 236 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 129 223 IPR001179 GO:0003755
Tpr1g4249 236 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 21 236 - -
Tpr1g4249 236 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 125 220 IPR001179 GO:0003755
Tpr1g4249 236 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 21 236 - -
Tpr1g4249 236 Gene3D - 85 230 IPR046357 GO:0003755
Tpr1g4249 236 SUPERFAMILY FKBP-like 93 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4249 Tpr-Chr1 49434081 49437644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4249 129 223 Calmodulin-binding Proteins AT5G48570 42.268 9.58e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4249 - - gmx:100815603 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4249 1 49434081 49437644 Tpr1g4249 1 49434081 49437644 ECH