Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4216 ATGTTTGGTTTGAACTTTGGTCATCATGTATTGCTTCATTTCATCGAAGATGAAGGTTCTATTGGAAGCGAGTTGCATTTCAGAGACGGGATTCTGTACTTACTACTTGTTGGCCTATTTTATAAAGGTATAAAGGTTTGTGATTTTGGGCTTTCCCGCTTAAAGGCCAATACATTTCTCTCTTCCAAGTCAGCTGCTGGGACTCCTGAGTCGATGGCTCCAGAAGTTCTTCGCGGCGAGCCATCAAATGAGAAGTCTGATATTTACAGCTTTGGAGTAATCATGTGGGAGCTTGCAACATTGCAACAGCCGTGGGGTAATTTGAACCCGGCACAGGTTGTTGCTGCTGTAGGCTTCAAGGGAAAAAGACTTGAGATCCCGCGCGAGTTGAATCCCCAAATAGCTGCAATAATTGAGGCTTGCTGGGCCAATGAGCCTTGGAAACGCCCTCCTTTCGCCAGTATTATGGACTCTCTGAGGTCATTACTCAAACCCCCTACACCTCAACCTGGTCTTCCAAACATACCAAGTCTCACCTGA 540 0.4593 MFGLNFGHHVLLHFIEDEGSIGSELHFRDGILYLLLVGLFYKGIKVCDFGLSRLKANTFLSSKSAAGTPESMAPEVLRGEPSNEKSDIYSFGVIMWELATLQQPWGNLNPAQVVAAVGFKGKRLEIPRELNPQIAAIIEACWANEPWKRPPFASIMDSLRSLLKPPTPQPGLPNIPSLT* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4216 179 Gene3D Transferase(Phosphotransferase) domain 1 24 169 - -
Tpr1g4216 179 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 35 168 - -
Tpr1g4216 179 SUPERFAMILY Protein kinase-like (PK-like) 44 169 IPR011009 -
Tpr1g4216 179 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 35 168 - -
Tpr1g4216 179 ProSiteProfiles Protein kinase domain profile. 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g4216 179 Pfam Protein tyrosine and serine/threonine kinase 43 159 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4216 Tpr-Chr1 48935364 48937551 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4216 35 175 MAP Kinase Kinase Kinase AT5G03730 78.723 4.64e-70 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Tpr1g4216 PK_Tyr_Ser-Thr 2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4216 K14510 - gmx:100775768 249.98