Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4214 ATGGAAATGCCTGCGAGAAGATCCAATTACTCGGTTCTAAGTCAAGTTCCCGACGATCAATTTTCATACGCTGCCGGAACTAGTGCTCCGTCGTTATCCAGCGACGGAAAACCTAGCAGAGGCGGTAAATTAGATAGAAGTTTCGATTGGGATTTACTCGGCGATCATAGGTCGGTTCAACAAGGGAACAATCGGATCGGGAATTTGTACTCGTCGATCGGGTTACAGAGACAGTCAAGCGGGAGTAGTTATGGTGAAAGTTCTTTGTCCGGTGGTGGTGAGTATTATGCTCAGACGTTGTCGACGGCGGCGGCTAGTGAGATTGATGCGTTTGGATATTTGCATGATGATGGATTTAAGGTTGGTGATGTGAGGAGTAAATTGTCTGAAGGTCCGCCGTGGACTGGTGGATCGTCTGGGAAGAGCTGGGCTCAGCAGACGGAGGAGAGTTATCAGTTGCAGTTGGCGTTGGCGCTTCGGCTTTCTTCGGATGCTACTTGTGCTGATGATCCGAATTTTCTGGATCCGGTACCTGATGAAGCGGCTTCGAGGCTTTCGTCTTCGCCTGAGGCTGTTTCTCATAGATTTTGGGTGAATGGCTGCCTATCATACTCCGACAAAATTCCTGATGGTTTTTACCTAATTCATGGGATGGATTCATATGTCTGGACTGTGTGCACTGATCTGCAGGAAAACAGCCGAATCCCATCAGTTGATAGTCTAAAGTCTGTACATCCCCGCATTGATTCTTCCCTTGAAGTAGTTTTGGTGGATCGACGTAGCGATGCCAGCTTGAGAGAACTGCAAAACATGGTTCATAACATTTCTTGTAGCAGCATAACAACAACAGAGGTTGTGGATCAGCTGTCCAAGCTGGTTTGCAACTGTATGGGGGGTTCAGCTTCTGCTGGGGAGGGCGAGCTTCTTTCTTTCTGGAAGGATTGCAGTAATAATCTGAAAGATTGCTTAGGATCTGTTGTTTTCCCCATAGGCAGTCTATCTGTTGGCCTTTGCAGGCACCGTGCCATACTATTCAAAGTACTAGCTGATGCCATTGATTTACCATGTCGAATTGCAAATGGCTGTAAATATTGCAAAAGAGATGATGCTTCTTCTTGTCTTGTTCGATTTGGGCTTGAGAGGGAATATCTTGTTGATTTAATTGGGAAGCCAGGACACTTATGCGAGCCTGATTCCTTGCTCAACGGTCCAGCTTCCATCTCATTTTGTTCACCCTTGCGCTTTCCAAGACTTAAACCAGCTGAAACTCCAATTGATTTCAGGTCGCTTGCCAAACAGTATTTCTCAGACTGTCTGTCTCTTGAGCTTTTCTTCGACAACAGTTCTGCAGAACAGTTCGATGCGAAATGCAATGAAAGGAATAACCTTAGGCCGATTTCAACTGACAGTAACAGAAGCTCTCAGCTTCCTTTGTATCCACAAGTTTCTCTTCTGAGCATTCATGATCAAGCTTCTGAAACATATATGTCATGTAACCCCCCTCAGAACATTACAGACTCAACAAATGTGGGCAAGTATCCACCCCCTTTAAAGCACAAGCGTCCTGTTGCTATTGCCAATGATGAAATCATTGAGGGTAGGAGGTTTATTGAAGCAAGTCAACTGATTCCTAGCAAGCCTACTCGAGATATTGCCTTTGACATGGAGGATTTGGCCATACCATGGAACGATCTTGTTTTAAAAGAAAAAATAGGATCAGGTTCTTTTGGAACTGTACATCGTGCTGAGTGGAATGACTCGGATGTTGCTGTGAAAATTTTGATGGAGCAAGATTTTCATGCTGAACGCTTCAAGGAATTCATGCGGGAGGTTGCAATAATGAAACATTTGCGGCATCCAAACATTGTTTTATTAATGGGGGCAGTCACACAACCTCCTAACTTATCAATTGTCACCGAATATTTATCAAGGGGTAGCTTATATAGGCTGTTACATAGACCTGGTGCCAAGGAAGTGTTGGATGAGAGGCGTAGGCTTAGTATGGCTTATGATGTGGCAAAGGGAATGAATTATCTTCACAAACGTAACCCCCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATACACAGTGAAGGTTTGTGATTTTGGGCTTTCCCGCTTAAAGGCCAATACATTTCTCTCTTCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGCGACGAGCCATCAAATGAGAAGTCTGATATTTACAGCTTTGGAGTAATCATGTGGGAGCTTGCAACATTGCAACAGCCGTGGGGTAATTTGAACCCAGCACAGGTTGTTGCTGCTGTAGGCTTCAAGGGAAAAAGACTTGAGATCCCGCGCGAGTTGAATCCCCAAATAGCTGCAATAATTGAGGCTTGCTGGGCCAATGAGCCTTGGAAACGCCCTTCTTTCGCCAGTATTATGGATTCTCTGAGGTCATTACTCAAACCCCCTACACCTCAACCTGGTCTTCCAAACATACCAAGTCTCACCTGA 2520 0.452 MEMPARRSNYSVLSQVPDDQFSYAAGTSAPSLSSDGKPSRGGKLDRSFDWDLLGDHRSVQQGNNRIGNLYSSIGLQRQSSGSSYGESSLSGGGEYYAQTLSTAAASEIDAFGYLHDDGFKVGDVRSKLSEGPPWTGGSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPDEAASRLSSSPEAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENSRIPSVDSLKSVHPRIDSSLEVVLVDRRSDASLRELQNMVHNISCSSITTTEVVDQLSKLVCNCMGGSASAGEGELLSFWKDCSNNLKDCLGSVVFPIGSLSVGLCRHRAILFKVLADAIDLPCRIANGCKYCKRDDASSCLVRFGLEREYLVDLIGKPGHLCEPDSLLNGPASISFCSPLRFPRLKPAETPIDFRSLAKQYFSDCLSLELFFDNSSAEQFDAKCNERNNLRPISTDSNRSSQLPLYPQVSLLSIHDQASETYMSCNPPQNITDSTNVGKYPPPLKHKRPVAIANDEIIEGRRFIEASQLIPSKPTRDIAFDMEDLAIPWNDLVLKEKIGSGSFGTVHRAEWNDSDVAVKILMEQDFHAERFKEFMREVAIMKHLRHPNIVLLMGAVTQPPNLSIVTEYLSRGSLYRLLHRPGAKEVLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDIYSFGVIMWELATLQQPWGNLNPAQVVAAVGFKGKRLEIPRELNPQIAAIIEACWANEPWKRPSFASIMDSLRSLLKPPTPQPGLPNIPSLT* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4214 839 Pfam Ethylene-responsive protein kinase Le-CTR1 190 395 - -
Tpr1g4214 839 PRINTS Tyrosine kinase catalytic domain signature 639 652 IPR001245 GO:0004672|GO:0006468
Tpr1g4214 839 PRINTS Tyrosine kinase catalytic domain signature 680 698 IPR001245 GO:0004672|GO:0006468
Tpr1g4214 839 PRINTS Tyrosine kinase catalytic domain signature 727 737 IPR001245 GO:0004672|GO:0006468
Tpr1g4214 839 PRINTS Tyrosine kinase catalytic domain signature 746 768 IPR001245 GO:0004672|GO:0006468
Tpr1g4214 839 PRINTS Tyrosine kinase catalytic domain signature 790 812 IPR001245 GO:0004672|GO:0006468
Tpr1g4214 839 CDD STKc_MAP3K-like 571 819 - -
Tpr1g4214 839 Gene3D Transferase(Phosphotransferase) domain 1 644 828 - -
Tpr1g4214 839 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 131 827 - -
Tpr1g4214 839 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 131 827 - -
Tpr1g4214 839 SMART serkin_6 565 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g4214 839 ProSiteProfiles Protein kinase domain profile. 565 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g4214 839 Gene3D Phosphorylase Kinase; domain 1 558 643 - -
Tpr1g4214 839 ProSitePatterns Protein kinases ATP-binding region signature. 571 592 IPR017441 GO:0005524
Tpr1g4214 839 Pfam Protein tyrosine and serine/threonine kinase 566 819 IPR001245 GO:0004672|GO:0006468
Tpr1g4214 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 686 698 IPR008271 GO:0004672|GO:0006468
Tpr1g4214 839 SUPERFAMILY Protein kinase-like (PK-like) 541 818 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4214 Tpr-Chr1 48911787 48923155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4214 1 830 MAP Kinase Kinase Kinase AT5G03730 64.971 0.0 976
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Tpr1g4214 PK_Tyr_Ser-Thr 3.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4214 K14510 - gmx:100800648 1354.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4214 1 48911787 48923155 Tpr1g4214 1 48911787 48923155 ECH