Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4204 ATGGCAACAGCAGCTCAGAAGCACTTACATGAACTACTCAAAGAAGATCAAGAACCATTCCTTCTAACCAACTACATTACAGAAAAACGTATTAATTTACTAAAAAGACCTTCCACAAACAACACCATACAATTGAAGAAACAAAAACCAACAACAACAGTTAATCTCCGCAAAAATGCTTGTTTTTTCTCATTCCAAAACACACCAGATATAAAAAAATCACCACTTTTTGAATTCTCTTCACCAACAAAAACCACTTTTCAAATTCCTGCTAAAACGGCGTCGCTTTTACTCGAAGCAGCTCTCAAAATTCAGAATAATAAGAAACCCCATTACAAAAACAAATCTTTTGGGGTTTTTGGTTCGTTGTTGAAGAAACTAACACAACGAAACAGAAACAAAAAGAGTGAATCATCAACAATTGAAGGTAATAACAATGTTTCTGTTAAGGATATTTTGAGATGGGATTCTTCTATTGGAAAAAGAGATAGAAAATGTTACAATGAAATCAGAGTGTGTTCCTGTGAAGTGGGGTTTACATGTTCTTCTTGCAATTGCAATGGAAGACATAGTAGTAGTGGTGTTTGGTCTGAGAGTAATGAAGATAAATCGTTGGATATGGAAACTTCGAGTAGTGGAAATTCTTGTGATGAGGTTGATGAGTTTGTGATGAATAAGAAGAAACAGAATGAAGATTGTGTTTGTTTTGATCATCGTGGGTTTTTCTGTGAAAGCCCTTTTCGTTTTGTTCTTGAAAGGAGTGTGTCTTCTTCCTCTGGCCACCGTACGCCGGAGTTTTCTTCGCCGGCGGATTCACCTAGTCGTCACCAAACAGAGGACAAAGAAGTTGACGGTGTGAACAAATTCCAATCAGCTAAAGATGAGGAAGAGAAGGAACAGTGTAGTCCAGTATCTGTTTTAGATCCACCCTTTCAGGATTATGATGATGATGATGATGATGATGATTGCCATGAAAACGATGATGAAGAGGATGATTATGATTTGGAGTGTAGCTACGCCAATGTACAAAGAACCAAGCAACAACTATTAGATAGACTTCGTAGATTCGAGCAACTTGCAGAATTAGATCCATTAGAACTCGAGAAAAGAATGCAAGAAGAAAACGAGTGCGAAACATTTTTCGAAGATGACGATGAAGATGAAAGCGATGCACCATGTGAAGAAAAGGCTCTAAGAGAAATAGTCAATGAAATCCTCTACAATTCAAGTGTTCATGATAGATGGCAAGACCAAGAAGTTCTTAAGAGACTTGTTTATGATCTCATTAAGGAAGAAGAGAAAGAACTTAGTTGTTCACAAGATATGAACAATGTAATGAAAAGGGTATGCAAGAAGATGGAATTGTGGAAAGAAGTGGAATCTAACACTATTGATATGATGATAGAAGAGGATTTTACTAGAGAGGAAATTGGGTGGAAGAAACATAATGAGGAGACAAAAGAGCTAGCTAGAGAGGTTGAGCTTTCTATCTTTAGCTTTTTAGTTGATGAATTTTCAGAGGAATTAGTATGTTAA 1536 0.3652 MATAAQKHLHELLKEDQEPFLLTNYITEKRINLLKRPSTNNTIQLKKQKPTTTVNLRKNACFFSFQNTPDIKKSPLFEFSSPTKTTFQIPAKTASLLLEAALKIQNNKKPHYKNKSFGVFGSLLKKLTQRNRNKKSESSTIEGNNNVSVKDILRWDSSIGKRDRKCYNEIRVCSCEVGFTCSSCNCNGRHSSSGVWSESNEDKSLDMETSSSGNSCDEVDEFVMNKKKQNEDCVCFDHRGFFCESPFRFVLERSVSSSSGHRTPEFSSPADSPSRHQTEDKEVDGVNKFQSAKDEEEKEQCSPVSVLDPPFQDYDDDDDDDDCHENDDEEDDYDLECSYANVQRTKQQLLDRLRRFEQLAELDPLELEKRMQEENECETFFEDDDEDESDAPCEEKALREIVNEILYNSSVHDRWQDQEVLKRLVYDLIKEEEKELSCSQDMNNVMKRVCKKMELWKEVESNTIDMMIEEDFTREEIGWKKHNEETKELAREVELSIFSFLVDEFSEELVC* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4204 511 Coils Coil 339 359 - -
Tpr1g4204 511 MobiDBLite consensus disorder prediction 258 310 - -
Tpr1g4204 511 PANTHER - 5 511 - -
Tpr1g4204 511 Pfam Domain of unknown function (DUF4378) 367 504 IPR025486 -
Tpr1g4204 511 MobiDBLite consensus disorder prediction 274 302 - -
Tpr1g4204 511 MobiDBLite consensus disorder prediction 258 273 - -
Tpr1g4204 511 PANTHER OS04G0572500 PROTEIN 5 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4204 Tpr-Chr1 48812552 48818655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4204 4 312 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 43.027 2.30e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4204 - - lang:109335034 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4204 1 48812552 48818655 Tpr1g4204 1 48812552 48818655 ECH