Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g4187 | ATGATGAATTGTGCCATCATGTTCTTCTTCTTCTTCCTCTTCTTAGGCACCTACATTGTACCGTGTCTTACATATAATGACACTCATGCACTTACTCTCTTCCGCCAACAAACAGACATACATGGCCAACTCCTCACCAACTGGACCGGAACAGATGCATGCTCGGCCACATGGCATGGCGTCATTTGCTCACCAAACAATCGTGTCACGTCCCTCACACTTCCGTCCCTCAACCTCCGAGGACCCATCGACTCCCTTTCTCCCCTCACCCATCTCCGCCTCCTCGACCTCCATAACAACCGCCTAAATGGCACTGTTTCCCCCTCTCTTCTCTCAAATTGCACAAACCTCAAACTCCTCTACCTCGCCGGAAACGACTTTTCTGGTCAAATCCCACCTGATATCTCCTCCCCGGTTAATCTCCTTCGTCTTGACCTCTCCGACAACAACCTTGCCGGTGCAATTCCAAATGAAATTTCCCGTTTAACTAGCCTCCTCACTCTCAGGCTTCAGAACAACGCACTCTCCGGTAACATCCCTGACCTCTCCTCTGCCATGCCGAATCTCACAGAGCTCAACATGACAAACAACGAATTCCACGGTAATATACCAAACTCCATGGTTAAAAAATTCGGTGATGAAAGCTTCTCCGGTAACGAAGGTTTATGTGGTTCAAAACCGTTCCGAGTCTGTTCCTCCACAGAGAACAATCCTCCTTTCTCTGAACCGGTTCAGACGGTTCCTTCAAACCCCAGTTCTTTCCCTGAAACAAGTGTAGTCGCAAGACCAAGAAGCCAACACCGTAAAGGGTTAAGCCCCGGCGCAATTGTAGCCATTGTGGTGGCTATTTGTGTTGCATTGTTAGTGGTAACATCTTTCGTTGTTGCTCAATGTTGTGCCAGAGGGAGAGGTGTTAATAGTAATTCCATAATGGGCAGTGAGGCTGGAAACGGAAAGAGGAAGAGTTATGGTAGTGAGAAGAAGGTGTATAATGCAAATGGTGGGGGTGGTGATAGTAGTGACGGGACTAGTGGAACTGATATGAGCAAGCTTGTGTTTTTTGATAGGAGGAATGGGTTTGAATTGGAGGATTTGTTGCGTGCTTCTGCTGAGATGCTTGGGAAGGGTAGTTTGGGAACTGTTTATAAAGCAGGGCTTGATGATGGTAGTACAGTTGCTGTTAAGAGGTTAAAAGATGCAAATCCCTGTGCTAGGCATGAGTTTGAGCAGTATATGGATGTGATTGGGAAGCTTAAACACCCTAATATTGTTAAACTTAGAGCTTATTATTATGCTAAGGAAGAAAAGCTTCTTGTCTATGATTATCTCTCAAATGGAAGTTTGCATGCTCTTCTTCATGGGAACCGTGGACCTGGGAGGATTCCATTGGATTGGACAACAAGAATAAGCTTGGTGTTAGGAGCAGCAAGAGGGGTAGCTAGGATTCATACAGAGTACAGTGCAGCAAAAGTGCCACATGGGAATGTGAAATCATCCAATGTACTACTTGACAAGAACGGTGTTGCTTGCATATCTGACTTTGGTTTGTCACTACTATTAAACCCTGTTCATGCAATTGCAAGATTGGGAGGGTACAGAGCACCTGAACAGACAGAACAAAAGAAACTGTCTCAGCAAGCTGATGTGTACAGTTTTGGAGTGTTGCTATTGGAAGTTCTCACAGGGAGAGCTCCTTCATTACATTATCCTTCCCCGGGGACGGCTCGTCCTCGTAAAGATGAAGAGGACCAAACTATGGTGGATCTTCCCAAATGGGTTCGATCAGTTGTGAAAGAAGAGTGGACTGGAGAGGTTTTTGATCAAGAACTTTTGCGATACAAGAATATTGAGGAAGAGCTTGTGTCAATGCTGCATGTTGGGTTGGCTTGTGTGGTGGCACAACCGGAGAAGAGGCCAACTATGGTAGATGTTGTTAAGATGATTGAGGATATCAGGGTGGAGCAATCTCCTCTGTGTGAGGACTATGATGAATCACGTGATTCACTTTCACCTTCCATTCCCACCACTGAAGATGGTTTGGCTTAG | 2046 | 0.4589 | MMNCAIMFFFFFLFLGTYIVPCLTYNDTHALTLFRQQTDIHGQLLTNWTGTDACSATWHGVICSPNNRVTSLTLPSLNLRGPIDSLSPLTHLRLLDLHNNRLNGTVSPSLLSNCTNLKLLYLAGNDFSGQIPPDISSPVNLLRLDLSDNNLAGAIPNEISRLTSLLTLRLQNNALSGNIPDLSSAMPNLTELNMTNNEFHGNIPNSMVKKFGDESFSGNEGLCGSKPFRVCSSTENNPPFSEPVQTVPSNPSSFPETSVVARPRSQHRKGLSPGAIVAIVVAICVALLVVTSFVVAQCCARGRGVNSNSIMGSEAGNGKRKSYGSEKKVYNANGGGGDSSDGTSGTDMSKLVFFDRRNGFELEDLLRASAEMLGKGSLGTVYKAGLDDGSTVAVKRLKDANPCARHEFEQYMDVIGKLKHPNIVKLRAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGVARIHTEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQTEQKKLSQQADVYSFGVLLLEVLTGRAPSLHYPSPGTARPRKDEEDQTMVDLPKWVRSVVKEEWTGEVFDQELLRYKNIEEELVSMLHVGLACVVAQPEKRPTMVDVVKMIEDIRVEQSPLCEDYDESRDSLSPSIPTTEDGLA* | 682 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g4187 | 681 | Gene3D | Transferase(Phosphotransferase) domain 1 | 443 | 669 | - | - | |
Tpr1g4187 | 681 | PANTHER | LRR RECEPTOR-LIKE KINASE | 20 | 671 | - | - | |
Tpr1g4187 | 681 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 20 | 671 | - | - | |
Tpr1g4187 | 681 | SUPERFAMILY | Protein kinase-like (PK-like) | 371 | 648 | IPR011009 | - | |
Tpr1g4187 | 681 | SUPERFAMILY | L domain-like | 24 | 208 | - | - | |
Tpr1g4187 | 681 | Pfam | Leucine rich repeat N-terminal domain | 26 | 64 | IPR013210 | - | |
Tpr1g4187 | 681 | ProSiteProfiles | Protein kinase domain profile. | 367 | 653 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g4187 | 681 | Gene3D | Ribonuclease Inhibitor | 104 | 233 | IPR032675 | - | |
Tpr1g4187 | 681 | MobiDBLite | consensus disorder prediction | 659 | 681 | - | - | |
Tpr1g4187 | 681 | Pfam | Protein kinase domain | 371 | 646 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g4187 | 681 | Gene3D | Ribonuclease Inhibitor | 23 | 103 | IPR032675 | - | |
Tpr1g4187 | 681 | Gene3D | Phosphorylase Kinase; domain 1 | 344 | 442 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g4187 | Tpr-Chr1 | 48497493 | 48500583 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g4187 | 23 | 677 | Receptor kinase-like Gene Family | AT2G36570 | 66.766 | 0.0 | 867 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Tpr1g4187 | Pkinase | 3.1e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g4187 | - | - | gmx:102660494 | 971.074 |