Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4187 ATGATGAATTGTGCCATCATGTTCTTCTTCTTCTTCCTCTTCTTAGGCACCTACATTGTACCGTGTCTTACATATAATGACACTCATGCACTTACTCTCTTCCGCCAACAAACAGACATACATGGCCAACTCCTCACCAACTGGACCGGAACAGATGCATGCTCGGCCACATGGCATGGCGTCATTTGCTCACCAAACAATCGTGTCACGTCCCTCACACTTCCGTCCCTCAACCTCCGAGGACCCATCGACTCCCTTTCTCCCCTCACCCATCTCCGCCTCCTCGACCTCCATAACAACCGCCTAAATGGCACTGTTTCCCCCTCTCTTCTCTCAAATTGCACAAACCTCAAACTCCTCTACCTCGCCGGAAACGACTTTTCTGGTCAAATCCCACCTGATATCTCCTCCCCGGTTAATCTCCTTCGTCTTGACCTCTCCGACAACAACCTTGCCGGTGCAATTCCAAATGAAATTTCCCGTTTAACTAGCCTCCTCACTCTCAGGCTTCAGAACAACGCACTCTCCGGTAACATCCCTGACCTCTCCTCTGCCATGCCGAATCTCACAGAGCTCAACATGACAAACAACGAATTCCACGGTAATATACCAAACTCCATGGTTAAAAAATTCGGTGATGAAAGCTTCTCCGGTAACGAAGGTTTATGTGGTTCAAAACCGTTCCGAGTCTGTTCCTCCACAGAGAACAATCCTCCTTTCTCTGAACCGGTTCAGACGGTTCCTTCAAACCCCAGTTCTTTCCCTGAAACAAGTGTAGTCGCAAGACCAAGAAGCCAACACCGTAAAGGGTTAAGCCCCGGCGCAATTGTAGCCATTGTGGTGGCTATTTGTGTTGCATTGTTAGTGGTAACATCTTTCGTTGTTGCTCAATGTTGTGCCAGAGGGAGAGGTGTTAATAGTAATTCCATAATGGGCAGTGAGGCTGGAAACGGAAAGAGGAAGAGTTATGGTAGTGAGAAGAAGGTGTATAATGCAAATGGTGGGGGTGGTGATAGTAGTGACGGGACTAGTGGAACTGATATGAGCAAGCTTGTGTTTTTTGATAGGAGGAATGGGTTTGAATTGGAGGATTTGTTGCGTGCTTCTGCTGAGATGCTTGGGAAGGGTAGTTTGGGAACTGTTTATAAAGCAGGGCTTGATGATGGTAGTACAGTTGCTGTTAAGAGGTTAAAAGATGCAAATCCCTGTGCTAGGCATGAGTTTGAGCAGTATATGGATGTGATTGGGAAGCTTAAACACCCTAATATTGTTAAACTTAGAGCTTATTATTATGCTAAGGAAGAAAAGCTTCTTGTCTATGATTATCTCTCAAATGGAAGTTTGCATGCTCTTCTTCATGGGAACCGTGGACCTGGGAGGATTCCATTGGATTGGACAACAAGAATAAGCTTGGTGTTAGGAGCAGCAAGAGGGGTAGCTAGGATTCATACAGAGTACAGTGCAGCAAAAGTGCCACATGGGAATGTGAAATCATCCAATGTACTACTTGACAAGAACGGTGTTGCTTGCATATCTGACTTTGGTTTGTCACTACTATTAAACCCTGTTCATGCAATTGCAAGATTGGGAGGGTACAGAGCACCTGAACAGACAGAACAAAAGAAACTGTCTCAGCAAGCTGATGTGTACAGTTTTGGAGTGTTGCTATTGGAAGTTCTCACAGGGAGAGCTCCTTCATTACATTATCCTTCCCCGGGGACGGCTCGTCCTCGTAAAGATGAAGAGGACCAAACTATGGTGGATCTTCCCAAATGGGTTCGATCAGTTGTGAAAGAAGAGTGGACTGGAGAGGTTTTTGATCAAGAACTTTTGCGATACAAGAATATTGAGGAAGAGCTTGTGTCAATGCTGCATGTTGGGTTGGCTTGTGTGGTGGCACAACCGGAGAAGAGGCCAACTATGGTAGATGTTGTTAAGATGATTGAGGATATCAGGGTGGAGCAATCTCCTCTGTGTGAGGACTATGATGAATCACGTGATTCACTTTCACCTTCCATTCCCACCACTGAAGATGGTTTGGCTTAG 2046 0.4589 MMNCAIMFFFFFLFLGTYIVPCLTYNDTHALTLFRQQTDIHGQLLTNWTGTDACSATWHGVICSPNNRVTSLTLPSLNLRGPIDSLSPLTHLRLLDLHNNRLNGTVSPSLLSNCTNLKLLYLAGNDFSGQIPPDISSPVNLLRLDLSDNNLAGAIPNEISRLTSLLTLRLQNNALSGNIPDLSSAMPNLTELNMTNNEFHGNIPNSMVKKFGDESFSGNEGLCGSKPFRVCSSTENNPPFSEPVQTVPSNPSSFPETSVVARPRSQHRKGLSPGAIVAIVVAICVALLVVTSFVVAQCCARGRGVNSNSIMGSEAGNGKRKSYGSEKKVYNANGGGGDSSDGTSGTDMSKLVFFDRRNGFELEDLLRASAEMLGKGSLGTVYKAGLDDGSTVAVKRLKDANPCARHEFEQYMDVIGKLKHPNIVKLRAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGVARIHTEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQTEQKKLSQQADVYSFGVLLLEVLTGRAPSLHYPSPGTARPRKDEEDQTMVDLPKWVRSVVKEEWTGEVFDQELLRYKNIEEELVSMLHVGLACVVAQPEKRPTMVDVVKMIEDIRVEQSPLCEDYDESRDSLSPSIPTTEDGLA* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4187 681 Gene3D Transferase(Phosphotransferase) domain 1 443 669 - -
Tpr1g4187 681 PANTHER LRR RECEPTOR-LIKE KINASE 20 671 - -
Tpr1g4187 681 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 671 - -
Tpr1g4187 681 SUPERFAMILY Protein kinase-like (PK-like) 371 648 IPR011009 -
Tpr1g4187 681 SUPERFAMILY L domain-like 24 208 - -
Tpr1g4187 681 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Tpr1g4187 681 ProSiteProfiles Protein kinase domain profile. 367 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g4187 681 Gene3D Ribonuclease Inhibitor 104 233 IPR032675 -
Tpr1g4187 681 MobiDBLite consensus disorder prediction 659 681 - -
Tpr1g4187 681 Pfam Protein kinase domain 371 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g4187 681 Gene3D Ribonuclease Inhibitor 23 103 IPR032675 -
Tpr1g4187 681 Gene3D Phosphorylase Kinase; domain 1 344 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4187 Tpr-Chr1 48497493 48500583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4187 23 677 Receptor kinase-like Gene Family AT2G36570 66.766 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr1g4187 Pkinase 3.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4187 - - gmx:102660494 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4187 1 48497493 48500583 Tpr1g4187 1 48497493 48500583 ECH