Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4174 ATGTTTGGTTTGAACTTTGGTCATCATGTATTGCTTCATTTCATCGAAGATGAAGGTTCTATTGGAAGCGAGTTGCATTTCAGAGACGGGATTCTGTACTTACTACTTGTTGGCCTATTTTATAAAGGTATAAAGGTTTGTGATTTTGGGCTTTCCCGCTTAAAGGCCAATACATTTCTCTCTTCCAAGTCAGCTGCTGGGACTCCTGAGTCGATGGCTCCAGAAGTTCTTCGCGACGAGCCATCAAATGAGAAGTCTGATATTTACAGCTTTGGAGTAATCATGTGGGAGCTTGCAACATTGCAACAGCCGTGGGGTAATTTGAACCCGGCACAGGTTGTTGCTGCTGTAGGCTTCAAGGGAAAAAGACTTGAGATCCCGCGCGAGTTGAATCCCCAAATAGCTGCAATAATTGAGGCTTGCTGGGCCAATGAGCCTTGGAAACGCCCTCCTTTCGCCAGTATTATGGACTCTCTGTGGTCATTACTCAAACCCCCTACACCTCAACCTGGTCTTCCAAACATACCAAGTCTCACCTGA 540 0.4574 MFGLNFGHHVLLHFIEDEGSIGSELHFRDGILYLLLVGLFYKGIKVCDFGLSRLKANTFLSSKSAAGTPESMAPEVLRDEPSNEKSDIYSFGVIMWELATLQQPWGNLNPAQVVAAVGFKGKRLEIPRELNPQIAAIIEACWANEPWKRPPFASIMDSLWSLLKPPTPQPGLPNIPSLT* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4174 179 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g4174 179 Pfam Protein tyrosine and serine/threonine kinase 43 159 IPR001245 GO:0004672|GO:0006468
Tpr1g4174 179 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 35 170 - -
Tpr1g4174 179 Gene3D Transferase(Phosphotransferase) domain 1 24 168 - -
Tpr1g4174 179 PANTHER BNAA03G01030D PROTEIN 35 170 IPR028324 GO:0004672
Tpr1g4174 179 SUPERFAMILY Protein kinase-like (PK-like) 44 170 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4174 Tpr-Chr1 48280735 48282940 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4174 35 175 MAP Kinase Kinase Kinase AT5G03730 78.723 9.84e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Tpr1g4174 PK_Tyr_Ser-Thr 6.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4174 K14510 - gmx:100775768 249.595