Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4168 ATGAAGATGATGATAATAGAATGTTGTGTCTCTAGAAGTACAACACGTGTCTGTGCCACTCTCCCTCAAACAAAATATCCATGTAACATTACAAGAAGACCTTTATCTTTGTCTCTCATCTCCACCACTTTCTCTGCTTTAATCTTCTCACTTACTCCTCAACCTTCATTTTCTTCTCCATCATCTTCTTCAAAATTTCCAATAGCTGATTTTTCCGAGCTCCCAAATTCTGGTGGTGTTAAGGCTTTGGAACTCCTTGTTGGTTCTGGTGAAGTTCCTGAAGATGGTGATCAGGTTGAGATTCATTACTATGGTAGACTAGCAGCAAAACAAGGATGGCGTTTTGATTCAACCTATGATCACAAAGATGAGAATGGTGATCCTAATCCTTTTGTCTTTGTCCTTGGCTCTGGAAAGTTCTTTGACAGGCAGAGGCTGTTCACTACCATTTTTAATCCAACTCGTCTTGCAAATGGTGAAGGCTCGACTTTAGGAACACTTATATTTGATATTGAACTGGTTGGTCTGAGGCATCATCAGTGA 543 0.3996 MKMMIIECCVSRSTTRVCATLPQTKYPCNITRRPLSLSLISTTFSALIFSLTPQPSFSSPSSSSKFPIADFSELPNSGGVKALELLVGSGEVPEDGDQVEIHYYGRLAAKQGWRFDSTYDHKDENGDPNPFVFVLGSGKFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELVGLRHHQ* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4168 180 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 92 140 IPR001179 GO:0003755
Tpr1g4168 180 Gene3D - 67 144 IPR046357 GO:0003755
Tpr1g4168 180 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 139 179 IPR044197 -
Tpr1g4168 180 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 6 139 IPR044197 -
Tpr1g4168 180 SUPERFAMILY FKBP-like 76 175 - -
Tpr1g4168 180 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 96 140 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4168 Tpr-Chr1 48234477 48237192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4168 55 177 Calmodulin-binding Proteins AT5G48570 32.609 4.32e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4168 - - cam:101514460 259.225