Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4163 ATGGCAACAGCAGCTCAGAAGCACTTACATGAACTACTCAAAGAAGATCAAGAACCATTCCTTCTAACCAACTACATTACAGAAAAACGTATTAATTTACTAAAAAGACCTTCCACAAACAACACCATACAATTGAAGAAACAAAAACCAACAACAACAGTTAATCTCTGCAAAAATGCTTGTTTTTTCTCATTCCAAAACACACCAGATATAAAAAAATCACCACTTTTTGAATTCTCTTCACCAACAAAAACCACTTTTCAAATTCCTGCTAAAACGGCGTCGCTTTTACTCGAAGCAGCTCTCAAAATTCAGAATAATAAGAAACCCCATTACAAAAACAAATCTTTTGGGGTTTTTGGTTCGTTGTTAAAGAAACTAACACAACGAAACAGAAACAAAAAGAGTGAATCATCAACAATTGAAGGTAATAACAATGTTTCTGTTAAGGATATTTTGAGATGGGATTCTTCTATTGGAAAAAGAGATAGAAAATGTTACAATGAAATCAGAGTGTGTTCCTGTGAAGTGGGGTTTACATGTTCTTCTTGCAATTGCAATGGAAGACATAGTAGTAGTGGTGTTTGGTCTGAGAGTAATGAAGATAAATCGTTGGATACGGAAACTTCGAGTAGTGGAAATTCTTGTGATGAGGTTGATGAGTTTGTGATTAATAAGAAGAAACAGAATGAAGATTGTGTTTGTTTTGATCATCGTGGGTTTTTGTGTGAAAGTCCTTTTCGTTTTGTTCTTGAAAGGAGTGTTTCTTCTTCCTCTGGCCACCGTACGCCGGAGTTTTCTTCGCCGGCGGATTCACCTAGTCGTCACCAAACAGAGGACAAAGAAGTTGACGGTGTGAACAAATTCCAATCAGCTAAAGATGAGGAAGAGAAGGAACAGTGTAGTCCAGTATCTGTTTTAGATCCACCCTTTCAGGATTATGATGATGATGATGATGATTGCCATGAAAACGATGATGAAGAGGATGATTATGATTTGGAGTGTAGCTACGCCAATGTACAAAGAACCAAGCAACAACTATTAGATAGACTTCGTAGATTCGAGCAACTTGCAGAATTAGATCCATTAGAACTCGAGAAAAGAATGCAAGAAGAAAACGAGTGCGAAACATTTTTCGAAGACGACGATGAAGATGAAAGCGATGCACCATGTGAAGAAAAGGCTCTAAGAGAAATAGTCAATGAAATCCTCTACAATTCAAGTGTTCATGATAGATGGCAAAACCAAGAAGTTCTTAAGAGACTTGTTTATGATCTCATTAAGGAAGAAGAGAATGAACTTAATTGTTCACAAGATATGAACAATGTAATGAAAAAGGTATGCAAGAAGATGGAATTGTGGAAAGAAGTGGAATCTAACACTATTGATATGATGATAGAAGAGGATTTTACTAGAGAGGAAATTGGGTGGAAGAAACATAATGAGGAGACAAAAGAGCTAGCTAGAGAGGTTGAGCTTTCTATCTTTAGCTTTTTAGTTGATGAATTTTCAGAGGAATTGGTATGTTAA 1530 0.3621 MATAAQKHLHELLKEDQEPFLLTNYITEKRINLLKRPSTNNTIQLKKQKPTTTVNLCKNACFFSFQNTPDIKKSPLFEFSSPTKTTFQIPAKTASLLLEAALKIQNNKKPHYKNKSFGVFGSLLKKLTQRNRNKKSESSTIEGNNNVSVKDILRWDSSIGKRDRKCYNEIRVCSCEVGFTCSSCNCNGRHSSSGVWSESNEDKSLDTETSSSGNSCDEVDEFVINKKKQNEDCVCFDHRGFLCESPFRFVLERSVSSSSGHRTPEFSSPADSPSRHQTEDKEVDGVNKFQSAKDEEEKEQCSPVSVLDPPFQDYDDDDDDCHENDDEEDDYDLECSYANVQRTKQQLLDRLRRFEQLAELDPLELEKRMQEENECETFFEDDDEDESDAPCEEKALREIVNEILYNSSVHDRWQNQEVLKRLVYDLIKEEENELNCSQDMNNVMKKVCKKMELWKEVESNTIDMMIEEDFTREEIGWKKHNEETKELAREVELSIFSFLVDEFSEELVC* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4163 509 Coils Coil 337 357 - -
Tpr1g4163 509 MobiDBLite consensus disorder prediction 258 311 - -
Tpr1g4163 509 PANTHER - 5 509 - -
Tpr1g4163 509 MobiDBLite consensus disorder prediction 274 302 - -
Tpr1g4163 509 MobiDBLite consensus disorder prediction 258 273 - -
Tpr1g4163 509 Pfam Domain of unknown function (DUF4378) 365 502 IPR025486 -
Tpr1g4163 509 PANTHER OS04G0572500 PROTEIN 5 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4163 Tpr-Chr1 48175676 48181273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4163 4 312 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 41.765 7.41e-50 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4163 - - lang:109335034 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0769 6 6473366 6476770 Tpr1g4163 1 48175676 48181273 PCT